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 9M4L | pdb_00009m4l

Crystal structure of 9-mer peptide from H5N1 avian influenza virus in complex with B4 DUCK MHC I (UAA*76)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8070473 3000071 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8070473 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CBeta-Caspe9m4lC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
ABeta-Caspe9m4lA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
DBeta-Caspe9m4lD1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
BBeta-Caspe9m4lB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
MHC class I antigen-
E, F
SER-ARG-TYR-LEU-THR-ASP-MET-THR-LEU---
B, D
Beta-2-microglobulin-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR003597Immunoglobulin C1-setDomain
A, C
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, C
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, C
IPR011161MHC class I-like antigen recognition-likeDomain
A, C
IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
A, C
IPR007110Immunoglobulin-like domainDomain
A, C
IPR050208Antigen-presenting and immune regulatory MHC class I-relatedFamily
A, C
IPR001039MHC class I alpha chain, alpha1 alpha2 domainsDomain
A, C
IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily
A, C
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
B, D
IPR003597Immunoglobulin C1-setDomain
B, D
IPR013783Immunoglobulin-like foldHomologous Superfamily
B, D
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B, D
IPR007110Immunoglobulin-like domainDomain
B, D
IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
B, D
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site