9LXH | pdb_00009lxh

DOCK5/ELMO1 complex with RhoG and Rac1 on lipid membrane


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyRas-like P-loop GTPases 8098956 3002022 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00071Ras family (Ras)Ras familyIncludes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ...Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].
Domain
PF16172DOCK N-terminus (DOCK_N)DOCK N-terminus- Family
PF00018SH3 domain (SH3_1)SH3 domainSH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel. Domain
PF14429C2 domain in Dock180 and Zizimin proteins (DOCK-C2)C2 domain in Dock180 and Zizimin proteinsThe Dock180/Dock1 and Zizimin proteins are atypical GTP/GDP exchange factors for the small GTPases Rac and Cdc42 and are implicated cell-migration and phagocytosis. Across all Dock180 proteins, two regions are conserved: C-terminus termed CZH2 or DH ...The Dock180/Dock1 and Zizimin proteins are atypical GTP/GDP exchange factors for the small GTPases Rac and Cdc42 and are implicated cell-migration and phagocytosis. Across all Dock180 proteins, two regions are conserved: C-terminus termed CZH2 or DHR2 (or the Dedicator of cytokinesis) whereas CZH1/DHR1 contain a new family of the C2 domain [1][2].
Domain
PF23554Dedicator of cytokinesis (DOCK) TPR region (TPR_DOCK)Dedicator of cytokinesis (DOCK) TPR region- Repeat
PF06920DHR-2, Lobe A (DHR-2_Lobe_A)DHR-2, Lobe A- Repeat
PF04727ELMO/CED-12 family (ELMO_CED12)ELMO/CED-12 family- Family
PF11841ELMO, armadillo-like helical domain (ELMO_ARM)ELMO, armadillo-like helical domain- Repeat
PF16457Pleckstrin homology domain (PH_12)Pleckstrin homology domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Rho-related GTP-binding protein RhoG
Dedicator of cytokinesis protein 5
Engulfment and cell motility protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR003578Small GTPase RhoFamily
IPR042734Rho-related GTP-binding protein RhoGFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR005225Small GTP-binding domainDomain
IPR001806Small GTPaseFamily
IPR043162Dedicator of cytokinesis, C-terminal, lobe CHomologous Superfamily
IPR016024Armadillo-type foldHomologous Superfamily
IPR042455Dedicator of cytokinesis, N-terminal, subdomain 1Homologous Superfamily
IPR026791Dedicator of cytokinesisFamily
IPR046773DOCKER, Lobe CDomain
IPR036028SH3-like domain superfamilyHomologous Superfamily
IPR056372Dedicator of cytokinesis, TPR repeats regionDomain
IPR046770DOCKER, Lobe BDomain
IPR027357DOCKER domainDomain
IPR046769DOCKER, Lobe ADomain
IPR032376Dedicator of cytokinesis, N-terminal domainDomain
IPR047025Dedicator of cytokinesis protein 1/5, SH3 domainDomain
IPR030717Dedicator of cytokinesis protein 5, DHR2 domainDomain
IPR001452SH3 domainDomain
IPR035892C2 domain superfamilyHomologous Superfamily
IPR027007C2 DOCK-type domainDomain
IPR043161Dedicator of cytokinesis, C-terminal, lobe AHomologous Superfamily
IPR001849Pleckstrin homology domainDomain
IPR006816ELMO domainDomain
IPR016024Armadillo-type foldHomologous Superfamily
IPR050868Engulfment and cell motility domain-containing proteinFamily
IPR024574ELMO, armadillo-like helical domainDomain
IPR011989Armadillo-like helicalHomologous Superfamily
IPR011993PH-like domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP84095
PharosQ9H7D0
PharosQ92556