9LXF | pdb_00009lxf

Structure of extended DNA-free MCM DH at 3.8 Angstroms resolution

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 2],
J [auth D]		PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
A [auth 2],
J [auth D]		PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
A [auth 2],
J [auth D]		PF23669DNA replication licensing factor MCM2-like, winged-helix domain (WHD_MCM2)DNA replication licensing factor MCM2-like, winged-helix domainThis is the winged-helix (WH) domain found at the C-terminal end of human DNA replication licensing factor MCM2 and similar eukaryotic proteins. MCM2 is a component of the MCM2-7 complex, the replicative helicase essential for DNA replication initiat ...This is the winged-helix (WH) domain found at the C-terminal end of human DNA replication licensing factor MCM2 and similar eukaryotic proteins. MCM2 is a component of the MCM2-7 complex, the replicative helicase essential for DNA replication initiation and elongation in eukaryotic cells, and a core component of the CDC45-MCM-GINS (CMG) helicase, the molecular machine that unwinds template DNA during replication, and around which the replisome is built [3].
Domain
A [auth 2],
J [auth D]		PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
A [auth 2],
J [auth D]		PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		PF23191MCM3-like, winged helix domain (WHD_MCM3_C)MCM3-like, winged helix domainThis small C-terminal winged helix (WH) domain is found in human DNA replication licensing factor MCM3 and similar eukaryotic sequences. MCM3 is a minichromosome maintenance (MCM) protein, a component of the MCM2-7 complex (MCM complex) which is the ...This small C-terminal winged helix (WH) domain is found in human DNA replication licensing factor MCM3 and similar eukaryotic sequences. MCM3 is a minichromosome maintenance (MCM) protein, a component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighbouring subunits [1].
Domain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
C [auth 4],
L [auth F]		PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
C [auth 4],
L [auth F]		PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
C [auth 4],
L [auth F]		PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
C [auth 4],
L [auth F]		PF21128MCM4, winged helix domain (WHD_MCM4)MCM4, winged helix domainDNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elong ...DNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells [1-3]. This is the winged helix domain (WHD) found at the C-terminal of MCM4 [1-3]. Upon ssDNA binding the MCM5-WHD moves out of the central channel and becomes disordered, the MCM6-WHD moves backward and away from the channel, and the MCM4-WHD now partially occludes the channel opening. These changes enable CMG (Cdc45, Mcm2-7, GINS, the eukaryotic replicative helicase) to encircle dsDNA, and is consistent with reports that showed the MCM2-7 matures into two fully assembled CMGs on dsDNA before origin DNA unwinding occurs [3].
Domain
C [auth 4],
L [auth F]		PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
D [auth 5],
N [auth H]		PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
D [auth 5],
N [auth H]		PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
D [auth 5],
N [auth H]		PF21933MCM5, C-terminal domain (MCM5_C)MCM5, C-terminal domainThis entry represents the C-terminal domain of MCM5 from humans and its homologues, which is a HTH domain [1]. MCM5 is part of the MCM2-7 complex. Domain
D [auth 5],
N [auth H]		PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
D [auth 5],
N [auth H]		PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
E [auth 6],
M [auth G]		PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
E [auth 6],
M [auth G]		PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
E [auth 6],
M [auth G]		PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
E [auth 6],
M [auth G]		PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain
F [auth 7],
G [auth A]		PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins. Domain
F [auth 7],
G [auth A]		PF00493MCM P-loop domain (MCM)MCM P-loop domainDomain
F [auth 7],
G [auth A]		PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins. Domain
F [auth 7],
G [auth A]		PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2],
J [auth D]		DNA replication licensing factor MCM2
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		Isoform 2 of DNA replication licensing factor MCM3
C [auth 4],
L [auth F]		DNA replication licensing factor MCM4
D [auth 5],
N [auth H]		DNA replication licensing factor MCM5
E [auth 6],
M [auth G]		DNA replication licensing factor MCM6
F [auth 7],
G [auth A]		DNA replication licensing factor MCM7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 2],
J [auth D]		IPR031327Mini-chromosome maintenance proteinFamily
A [auth 2],
J [auth D]		IPR018525Mini-chromosome maintenance, conserved siteConserved Site
A [auth 2],
J [auth D]		IPR001208MCM domainDomain
A [auth 2],
J [auth D]		IPR041562MCM, AAA-lid domainDomain
A [auth 2],
J [auth D]		IPR008045DNA replication licensing factor Mcm2Family
A [auth 2],
J [auth D]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth 2],
J [auth D]		IPR059098DNA replication licensing factor MCM2-like, winged-helix domainDomain
A [auth 2],
J [auth D]		IPR027925MCM, N-terminal domainDomain
A [auth 2],
J [auth D]		IPR033762MCM OB domainDomain
A [auth 2],
J [auth D]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR031327Mini-chromosome maintenance proteinFamily
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR018525Mini-chromosome maintenance, conserved siteConserved Site
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR003593AAA+ ATPase domainDomain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR001208MCM domainDomain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR041562MCM, AAA-lid domainDomain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR027925MCM, N-terminal domainDomain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR056575MCM3-like, winged helix domainDomain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR008046DNA replication licensing factor Mcm3Family
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR033762MCM OB domainDomain
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4],
L [auth F]		IPR027925MCM, N-terminal domainDomain
C [auth 4],
L [auth F]		IPR031327Mini-chromosome maintenance proteinFamily
C [auth 4],
L [auth F]		IPR008047DNA replication licensing factor MCM4Family
C [auth 4],
L [auth F]		IPR018525Mini-chromosome maintenance, conserved siteConserved Site
C [auth 4],
L [auth F]		IPR033762MCM OB domainDomain
C [auth 4],
L [auth F]		IPR001208MCM domainDomain
C [auth 4],
L [auth F]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4],
L [auth F]		IPR041562MCM, AAA-lid domainDomain
C [auth 4],
L [auth F]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth 5],
N [auth H]		IPR031327Mini-chromosome maintenance proteinFamily
D [auth 5],
N [auth H]		IPR018525Mini-chromosome maintenance, conserved siteConserved Site
D [auth 5],
N [auth H]		IPR001208MCM domainDomain
D [auth 5],
N [auth H]		IPR041562MCM, AAA-lid domainDomain
D [auth 5],
N [auth H]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth 5],
N [auth H]		IPR054125MCM5, C-terminal domainDomain
D [auth 5],
N [auth H]		IPR027925MCM, N-terminal domainDomain
D [auth 5],
N [auth H]		IPR033762MCM OB domainDomain
D [auth 5],
N [auth H]		IPR008048DNA replication licensing factor Mcm5Family
D [auth 5],
N [auth H]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth 6],
M [auth G]		IPR008049DNA replication licensing factor Mcm6Family
E [auth 6],
M [auth G]		IPR041024Mcm6, C-terminal winged-helix domainDomain
E [auth 6],
M [auth G]		IPR031327Mini-chromosome maintenance proteinFamily
E [auth 6],
M [auth G]		IPR018525Mini-chromosome maintenance, conserved siteConserved Site
E [auth 6],
M [auth G]		IPR001208MCM domainDomain
E [auth 6],
M [auth G]		IPR041562MCM, AAA-lid domainDomain
E [auth 6],
M [auth G]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth 6],
M [auth G]		IPR027925MCM, N-terminal domainDomain
E [auth 6],
M [auth G]		IPR033762MCM OB domainDomain
E [auth 6],
M [auth G]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth 7],
G [auth A]		IPR031327Mini-chromosome maintenance proteinFamily
F [auth 7],
G [auth A]		IPR008050DNA replication licensing factor Mcm7Family
F [auth 7],
G [auth A]		IPR018525Mini-chromosome maintenance, conserved siteConserved Site
F [auth 7],
G [auth A]		IPR003593AAA+ ATPase domainDomain
F [auth 7],
G [auth A]		IPR001208MCM domainDomain
F [auth 7],
G [auth A]		IPR041562MCM, AAA-lid domainDomain
F [auth 7],
G [auth A]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth 7],
G [auth A]		IPR027925MCM, N-terminal domainDomain
F [auth 7],
G [auth A]		IPR033762MCM OB domainDomain
F [auth 7],
G [auth A]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 2],
J [auth D]		Pharos:  P49736
B [auth 3],
H [auth B],
I [auth C],
K [auth E]		Pharos:  P25205
C [auth 4],
L [auth F]		Pharos:  P33991
D [auth 5],
N [auth H]		Pharos:  P33992
E [auth 6],
M [auth G]		Pharos:  Q14566
F [auth 7],
G [auth A]		Pharos:  P33993