9LTI | pdb_00009lti

Cryo-EM structure of LH1-RC from Ery. sanguineus


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
IA [auth M]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
HA [auth H]PF03967Photosynthetic reaction centre, H-chain N-terminal region (PRCH)Photosynthetic reaction centre, H-chain N-terminal region- Family
HA [auth H]PF05239PRC-barrel domain (PRC)PRC-barrel domainThe PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].
Domain
GA [auth L]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
A,
B,
C,
D,
E,
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunitDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
IA [auth M]Reaction center protein M chain
JA [auth T]Secreted protein- - -
HA [auth H]Photosynthetic reaction center H subunit-
GA [auth L]Reaction center protein L chain
Antenna complex alpha/beta subunit
A,
B,
C,
D,
E,
Light-harvesting complex 1 alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IA [auth M]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
IA [auth M]IPR005781Photosynthetic reaction centre, M subunitFamily
IA [auth M]IPR000484Photosynthetic reaction centre, L/MFamily
IA [auth M]IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
HA [auth H]IPR014747Bacterial photosynthetic reaction centre, H-chain, C-terminalHomologous Superfamily
HA [auth H]IPR015810Photosynthetic reaction centre, H subunit, N-terminalDomain
HA [auth H]IPR005652Photosynthetic reaction centre, H subunitFamily
HA [auth H]IPR037097Photosynthetic reaction centre, H subunit, N-terminal domain superfamilyHomologous Superfamily
HA [auth H]IPR011033PRC-barrel-like superfamilyHomologous Superfamily
HA [auth H]IPR027275PRC-barrel domainDomain
GA [auth L]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
GA [auth L]IPR000484Photosynthetic reaction centre, L/MFamily
GA [auth L]IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
GA [auth L]IPR005871Photosynthetic reaction centre, L subunitFamily
IPR000066Antenna complex, alpha/beta subunitDomain
IPR023624Antenna complex, beta domain superfamilyHomologous Superfamily
IPR035889Light-harvesting complexHomologous Superfamily
IPR023623Antenna complex, beta subunit, conserved siteConserved Site
IPR002362Light-harvesting protein B beta chainFamily
A,
B,
C,
D,
E,
IPR000066Antenna complex, alpha/beta subunitDomain
A,
B,
C,
D,
E,
IPR018332Antenna complex, alpha subunitFamily
A,
B,
C,
D,
E,
IPR002361Antenna complex, alpha subunit conserved siteConserved Site
A,
B,
C,
D,
E,
IPR035889Light-harvesting complexHomologous Superfamily