9LN6 | pdb_00009ln6

Structure of human NLRP14-UHRF1 complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyUbiquitin-like 8040729 3000157 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
PF05729NACHT domain (NACHT)NACHT domainThis NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation [1]. This family is closely related to Pfam:PF00931. Domain
PF13516Leucine Rich repeat (LRR_6)Leucine Rich repeat- Repeat
PF17776NLRC4 helical domain HD2 (NLRC4_HD2)NLRC4 helical domain HD2This entry represents a helical domain found in the NLRC4 protein [2] and NOD2 protein [1]. Domain
PF17779NOD2 winged helix domain (WHD_NOD2)NOD2 winged helix domainThis winged helix domain is found in the NOD2 protein [1]. Its molecular function is not known. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Maltose/maltodextrin-binding periplasmic protein,E3 ubiquitin-protein ligase UHRF1
Maltose/maltodextrin-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 14

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006061Solute-binding family 1, conserved siteConserved Site
IPR006060Maltose/Cyclodextrin ABC transporter, substrate-binding proteinFamily
IPR006059Bacterial-type extracellular solute-binding proteinFamily
IPR015947PUA-like superfamilyHomologous Superfamily
IPR001965Zinc finger, PHD-typeDomain
IPR047406E3 ubiquitin-protein ligase UHRF1, ubiquitin-like domainDomain
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
IPR001841Zinc finger, RING-typeDomain
IPR036987SRA-YDG superfamilyHomologous Superfamily
IPR003105SRA-YDGDomain
IPR019787Zinc finger, PHD-fingerDomain
IPR011011Zinc finger, FYVE/PHD-typeHomologous Superfamily
IPR017907Zinc finger, RING-type, conserved siteConserved Site
IPR000626Ubiquitin-like domainDomain
IPR021991UHRF1, tandem tudor domainDomain
IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IPR045134UHRF1/2-likeFamily
IPR006061Solute-binding family 1, conserved siteConserved Site
IPR006060Maltose/Cyclodextrin ABC transporter, substrate-binding proteinFamily
IPR006059Bacterial-type extracellular solute-binding proteinFamily
IPR011029Death-like domain superfamilyHomologous Superfamily
IPR041267NACHT, LRR and PYD domains-containing protein, helical domain HD2Domain
IPR001611Leucine-rich repeatRepeat
IPR041075NOD1/2, winged helix domainDomain
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR050637NLRP family, innate immunity and inflammation regulatorsFamily
IPR004020DAPIN domainDomain
IPR007111NACHT nucleoside triphosphataseDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily