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 9L9P | pdb_00009l9p

Cryo-EM structure of bacteriophage T1 tail tip complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth J]Beta-lactamase2e9l9pJ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-lactamase2ECOD (v295.2)
A [auth S]COesterase, Abhydrolase_3, BD-FAEe9l9pS2 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: COesterase, Abhydrolase_3, BD-FAEECOD (v295.2)
A [auth S]e9l9pS6 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: Hypothetical protein YqbG-likeF:ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth H]PF05939Phage minor tail protein (Phage_min_tail)Phage minor tail protein- Family
C [auth J]PF05100Phage minor tail protein L (Phage_tail_L)Phage minor tail protein L- Family
A [auth S]PF13550Putative phage tail protein (Phage-tail_3)Putative phage tail proteinThis putative domain is found in the large gene transfer agent protein. These produce defective phage like particles. This domain is similar to other phage-tail protein families. Domain
A [auth S]PF24801Tip attachment protein J,FNIII-A domain (FNIII-A_GpJ)Tip attachment protein J,FNIII-A domainThis domain is found towards the N-terminal end of Tip attachment protein J from the bacteriophage lambda (GpJ) and similar sequences from tailed bacteriophages and bacterial prophages [1]. GpJ is involved in the induction of viral DNA ejection. It a ...This domain is found towards the N-terminal end of Tip attachment protein J from the bacteriophage lambda (GpJ) and similar sequences from tailed bacteriophages and bacterial prophages [1]. GpJ is involved in the induction of viral DNA ejection. It attaches the virion to the host receptor. This domain shows an Ig-like structure [1,2].
Domain