Annotations: 9L9J

State H of archaeal pre-50S ribosome

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0]	23S RNA	-	-	-
C [auth A]	Large ribosomal subunit protein eL39	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
D [auth B]	Translation initiation factor 6	translation factor activity translation initiation factor activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding	ribonucleoprotein complex biogenesis organelle assembly membraneless organelle assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization cellular component assembly cytosolic ribosome assembly cellular process cellular component organization or biogenesis ribosome assembly	-
E	Large ribosomal subunit protein eL8	RNA binding binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity, acting on a tRNA hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA binding binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity, acting on a tRNA hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA endonuclease activity ribonuclease P activity catalytic activity structural molecule activity structural constituent of ribosome	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process tRNA processing RNA 5'-end processing metabolic process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process tRNA processing RNA 5'-end processing metabolic process cellular process macromolecule metabolic process RNA processing tRNA 5'-leader removal tRNA 5'-end processing protein metabolic process translation protein biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
G	Large ribosomal subunit protein eL15	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
H	Large ribosomal subunit protein eL18	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
I	Large ribosomal subunit protein uL18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J	Large ribosomal subunit protein eL19	RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L	Large ribosomal subunit protein uL22	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M	Large ribosomal subunit protein eL24	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
O	Large ribosomal subunit protein uL30	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribosomal large subunit biogenesis macromolecule biosynthetic process nucleic acid metabolic process maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) biosynthetic process cellular process metabolic process macromolecule metabolic process maturation of LSU-rRNA protein metabolic process translation protein biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R	Large ribosomal subunit protein eL43	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
T	Large ribosomal subunit protein eL42	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
V	Large ribosomal subunit protein uL3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W	Large ribosomal subunit protein uL4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Z [auth b]	Large ribosomal subunit protein uL13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth d]	Large ribosomal subunit protein uL29	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
CA [auth e]	Large ribosomal subunit protein eL20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
F	Large ribosomal subunit protein uL16	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
FA [auth j]	Large ribosomal subunit protein eL40	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
EA [auth i]	Large ribosomal subunit protein uL15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
DA [auth f]	Large ribosomal subunit protein uL14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
AA [auth c]	Large ribosomal subunit protein uL23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Y	Large ribosomal subunit protein uL6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
X	Large ribosomal subunit protein uL5	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
U	Large ribosomal subunit protein uL2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
B [auth 1]	5S RNA	-	-	-
S	Large ribosomal subunit protein eL37	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q	Large ribosomal subunit protein eL32	DNA binding binding nucleic acid binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding structural molecule activity structural constituent of ribosome	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process macromolecule metabolic process DNA repair biosynthetic process cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process macromolecule metabolic process DNA repair biosynthetic process protein metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P	Large ribosomal subunit protein eL31	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N	Large ribosomal subunit protein uL24	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
K	Large ribosomal subunit protein eL21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth A]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
C [auth A]	IPR000077	Large ribosomal subunit protein eL39	Family
C [auth A]	IPR020083	Large ribosomal subunit protein eL39, conserved site	Conserved Site
D [auth B]	IPR002769	Translation initiation factor IF6	Family
E	IPR050257	Large ribosomal subunit protein eL8/uL1-like	Family
E	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
E	IPR022481	Large ribosomal subunit protein eL8, archaea	Family
E	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
E	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
G	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
G	IPR020925	Large ribosomal subunit protein eL15, conserved site	Conserved Site
G	IPR024794	Large ribosomal subunit protein eL15 core domain superfamily	Homologous Superfamily
G	IPR020926	Large ribosomal subunit protein eL15, archaeal	Family
G	IPR000439	Large ribosomal subunit protein eL15	Family
H	IPR022947	Large ribosomal subunit protein eL18, archaea	Family
H	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
H	IPR021132	Large ribosomal subunit protein eL18, conserved site	Conserved Site
H	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
H	IPR000039	Large ribosomal subunit protein eL18	Family
H	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
I	IPR057268	Large ribosomal subunit protein uL18	Family
I	IPR057267	Large ribosomal subunit protein uL18, archaea	Family
I	IPR005485	Large ribosomal subunit protein uL18, eukaryota/archaea	Family
J	IPR015974	Large ribosomal subunit protein eL19, domain 3	Homologous Superfamily
J	IPR039547	Large ribosomal subunit protein eL19	Family
J	IPR023638	Large ribosomal subunit protein eL19, conserved site	Conserved Site
J	IPR057260	Ribosomal protein L19e, C-terminal domain	Domain
J	IPR033936	Large ribosomal subunit protein eL19, archaea	Domain
J	IPR015973	Large ribosomal subunit protein eL19, domain 2	Homologous Superfamily
J	IPR015972	Large ribosomal subunit protein eL19, domain 1	Homologous Superfamily
J	IPR057259	Ribosomal protein L19e, N-terminal domain	Domain
J	IPR035970	Large ribosomal subunit protein eL19 superfamily	Homologous Superfamily
J	IPR000196	Large ribosomal subunit protein eL19 domain	Domain
L	IPR005721	Large ribosomal subunit protein uL22, eukaryota/archaea	Family
L	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
L	IPR001063	Large ribosomal subunit protein uL22	Family
L	IPR057265	Large ribosomal subunit protein uL22, archaea	Family
M	IPR000988	Large ribosomal subunit protein eL24-related, N-terminal	Domain
M	IPR055345	Large ribosomal subunit protein eL24-like, archaea	Family
M	IPR023442	Large ribosomal subunit protein eL24, conserved site	Conserved Site
M	IPR038630	Ribosomal protein L24e/L24 superfamily	Homologous Superfamily
O	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
O	IPR039699	Large ribosomal subunit protein uL30	Family
O	IPR035808	Large ribosomal subunit protein uL30, eukaryota/archaea	Domain
O	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
O	IPR018038	Large ribosomal subunit protein uL30, conserved site	Conserved Site
O	IPR005997	Large ribosomal subunit protein uL30, archaea	Family
R	IPR002674	Large ribosomal subunit protein eL43	Family
R	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
R	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
R	IPR050522	Eukaryotic ribosomal protein eL43	Family
T	IPR053708	Eukaryotic Ribosomal Large Subunit eL42	Homologous Superfamily
T	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
T	IPR000552	Large ribosomal subunit protein eL42	Family
V	IPR019928	Large ribosomal subunit protein uL3, archaea	Family
V	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
V	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
V	IPR044892	Ribosomal protein L3, domain 3, archaeal-type superfamily	Homologous Superfamily
V	IPR000597	Large ribosomal subunit protein uL3	Family
V	IPR045077	Large ribosomal subunit protein uL3, archaea/eukaryota	Family
W	IPR019970	Large ribosomal subunit protein uL4, archaea	Family
W	IPR002136	Large ribosomal subunit protein uL4	Family
W	IPR013000	Large ribosomal subunit protein uL4, eukaryota/archaea, conserved site	Conserved Site
W	IPR045240	Large ribosomal subunit protein uL4, eukaryota/archaea	Family
W	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
Z [auth b]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
Z [auth b]	IPR005822	Large ribosomal subunit protein uL13	Family
Z [auth b]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
Z [auth b]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
Z [auth b]	IPR005755	Large ribosomal subunit protein uL13, eukaryota/archaea	Family
BA [auth d]	IPR001854	Large ribosomal subunit protein uL29	Family
BA [auth d]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
BA [auth d]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
CA [auth e]	IPR028877	Large ribosomal subunit protein eL20	Family
CA [auth e]	IPR023573	Large ribosomal subunit protein eL20 domain	Domain
F	IPR001197	Large ribosomal subunit protein uL16, eukaryota/archaea	Family
F	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
F	IPR022981	Large ribosomal subunit protein uL16, archaea	Family
F	IPR047873	Large ribosomal subunit protein uL16	Family
FA [auth j]	IPR023657	Large ribosomal subunit protein eL40, archaea	Family
FA [auth j]	IPR001975	Large ribosomal subunit protein eL40 domain	Domain
FA [auth j]	IPR038587	Large ribosomal subunit protein eL40 superfamily	Homologous Superfamily
FA [auth j]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
EA [auth i]	IPR027386	Ribosomal uL15, N-terminal	Homologous Superfamily
EA [auth i]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
EA [auth i]	IPR030878	Large ribosomal subunit protein uL15	Family
EA [auth i]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
EA [auth i]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
DA [auth f]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
DA [auth f]	IPR000218	Large ribosomal subunit protein uL14	Family
DA [auth f]	IPR019971	Large ribosomal subunit protein uL14, archaea	Family
DA [auth f]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
AA [auth c]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
AA [auth c]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
AA [auth c]	IPR019985	Large ribosomal subunit protein uL23	Family
AA [auth c]	IPR001014	Large ribosomal subunit protein uL23, conserved site	Conserved Site
AA [auth c]	IPR013025	Large ribosomal subunit protein uL23-like	Family
Y	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
Y	IPR019907	Large ribosomal subunit protein uL6, archaea	Family
Y	IPR002359	Large ribosomal subunit protein uL6, conserved site-2	Conserved Site
Y	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
Y	IPR000702	Large ribosomal subunit protein uL6-like	Family
X	IPR057266	Large ribosomal subunit protein uL5, eukaryota/archaea	Family
X	IPR022804	Large ribosomal subunit protein uL5, archaea	Family
X	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
X	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
X	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
X	IPR002132	Large ribosomal subunit protein uL5	Family
U	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
U	IPR023672	Large ribosomal subunit protein uL2, archaea/eukaryota	Family
U	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
U	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
U	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
U	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
U	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
U	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
U	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
U	IPR002171	Large ribosomal subunit protein uL2	Family
S	IPR001569	Large ribosomal subunit protein eL37	Family
S	IPR018267	Large ribosomal subunit protein eL37, conserved site	Conserved Site
S	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
S	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
Q	IPR023654	Large ribosomal subunit protein eL32, archaea	Family
Q	IPR001515	Large ribosomal subunit protein eL32	Family
Q	IPR018263	Large ribosomal subunit protein eL32, conserved site	Conserved Site
Q	IPR036351	Large ribosomal subunit protein eL32 superfamily	Homologous Superfamily
Q	IPR060101	SAM-like helix-hairpin-helix tandem	Domain
Q	IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	Homologous Superfamily
Q	IPR003583	Helix-hairpin-helix DNA-binding motif, class 1	Domain
P	IPR023621	Large ribosomal subunit protein eL31 domain superfamily	Homologous Superfamily
P	IPR000054	Large ribosomal subunit protein eL31	Family
N	IPR005756	Large ribosomal subunit protein uL24, eukaryota_archaea	Family
N	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
N	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
N	IPR005824	KOW	Domain
N	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
N	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
K	IPR018259	Large ribosomal subunit protein eL21, conserved site	Conserved Site
K	IPR036948	Large ribosomal subunit protein eL21 superfamily	Homologous Superfamily
K	IPR022856	Large ribosomal subunit protein eL21, archaea	Family
K	IPR001147	Large ribosomal subunit protein eL21	Family
K	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9L9J | pdb_00009l9j

State H of archaeal pre-50S ribosome

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage