9L56 | pdb_00009l56

Plastid-localized exonuclease 1

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01367	5'-3' exonuclease, C-terminal SAM fold (5_3_exonuc)	5'-3' exonuclease, C-terminal SAM fold		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	5'-3' exonuclease family protein	catalytic activity, acting on DNA DNA-directed DNA polymerase activity DNA polymerase activity catalytic activity, acting on a nucleic acid transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups DNA binding binding nucleic acid binding hydrolase activity, acting on ester bonds nuclease activity 5'-3' exonuclease activity catalytic activity, acting on DNA DNA-directed DNA polymerase activity DNA polymerase activity catalytic activity, acting on a nucleic acid transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups DNA binding binding nucleic acid binding hydrolase activity, acting on ester bonds nuclease activity 5'-3' exonuclease activity hydrolase activity exonuclease activity 5'-flap endonuclease activity endonuclease activity DNA nuclease activity DNA endonuclease activity flap endonuclease activity DNA endonuclease activity, producing 5'-phosphomonoesters	DNA-templated DNA replication lagging strand elongation primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA strand elongation DNA replication DNA replication, Okazaki fragment processing metabolic process cellular process DNA strand elongation involved in DNA replication macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR002421	5'-3' exonuclease	Domain
A, B	IPR038969	Flap endonuclease	Family
A, B	IPR029060	PIN-like domain superfamily	Homologous Superfamily
A, B	IPR036279	5'-3' exonuclease, C-terminal domain superfamily	Homologous Superfamily
A, B	IPR008918	Helix-hairpin-helix motif, class 2	Conserved Site
A, B	IPR020045	DNA polymerase I-like, H3TH domain	Domain
A, B	IPR020046	5'-3' exonuclease, alpha-helical arch, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.