Annotations: 9KD0

Crystal structure of Bacteroides ovatus KduI2 responsible for metabolism of glycosaminoglycan

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	7tm_1	e9kd0A1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: 7tm_1	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	isomerase activity intramolecular oxidoreductase activity, interconverting aldoses and ketoses intramolecular oxidoreductase activity catalytic activity 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	catabolic process oxoacid metabolic process carboxylic acid metabolic process monocarboxylic acid catabolic process D-glucuronate catabolic process glucuronate metabolic process carboxylic acid catabolic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process small molecule catabolic process glucuronate catabolic process monosaccharide metabolic process catabolic process oxoacid metabolic process carboxylic acid metabolic process monocarboxylic acid catabolic process D-glucuronate catabolic process glucuronate metabolic process carboxylic acid catabolic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process small molecule catabolic process glucuronate catabolic process monosaccharide metabolic process carbohydrate metabolic process D-galacturonate catabolic process carbohydrate catabolic process primary metabolic process D-galacturonate metabolic process monosaccharide catabolic process galacturonate catabolic process pectin metabolic process macromolecule catabolic process pectin catabolic process polysaccharide metabolic process polysaccharide catabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR027449	5-keto-4-deoxyuronate isomerase, N-terminal	Homologous Superfamily
A	IPR014710	PpnP-like, jelly roll fold	Homologous Superfamily
A	IPR011051	RmlC-like cupin domain superfamily	Homologous Superfamily
A	IPR021120	KduI/IolB isomerase	Family
A	IPR007045	5-keto 4-deoxyuronate isomerase	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9KD0 | pdb_00009kd0

Crystal structure of Bacteroides ovatus KduI2 responsible for metabolism of glycosaminoglycan

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage