9JSM | pdb_00009jsm

Clostridium perfringens iota toxin pore Ib in prepore VI state

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G	PF17475	Clostridial binary toxin B/anthrax toxin PA domain 2 (Binary_toxB_2)	Clostridial binary toxin B/anthrax toxin PA domain 2	This domain forms the middle beta sandwish domain in anthrax toxin.	Domain
G	PF17476	Clostridial binary toxin B/anthrax toxin PA domain 3 (Binary_toxB_3)	Clostridial binary toxin B/anthrax toxin PA domain 3	This entry represents the beta-grasp domain in anthrax protective antigen.	Domain
G	PF03495	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain (Binary_toxB)	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain	This domain is a calcium binding domain in the anthrax toxin protective antigen.	Domain
F	PF17475	Clostridial binary toxin B/anthrax toxin PA domain 2 (Binary_toxB_2)	Clostridial binary toxin B/anthrax toxin PA domain 2	This domain forms the middle beta sandwish domain in anthrax toxin.	Domain
F	PF17476	Clostridial binary toxin B/anthrax toxin PA domain 3 (Binary_toxB_3)	Clostridial binary toxin B/anthrax toxin PA domain 3	This entry represents the beta-grasp domain in anthrax protective antigen.	Domain
F	PF03495	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain (Binary_toxB)	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain	This domain is a calcium binding domain in the anthrax toxin protective antigen.	Domain
A, B, C, D, E	PF17475	Clostridial binary toxin B/anthrax toxin PA domain 2 (Binary_toxB_2)	Clostridial binary toxin B/anthrax toxin PA domain 2	This domain forms the middle beta sandwish domain in anthrax toxin.	Domain
A, B, C, D, E	PF17476	Clostridial binary toxin B/anthrax toxin PA domain 3 (Binary_toxB_3)	Clostridial binary toxin B/anthrax toxin PA domain 3	This entry represents the beta-grasp domain in anthrax protective antigen.	Domain
A, B, C, D, E	PF03495	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain (Binary_toxB)	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain	This domain is a calcium binding domain in the anthrax toxin protective antigen.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G	Iota toxin component Ib	-	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis	cellular anatomical structure extracellular region
F	Iota toxin component Ib	-	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis	cellular anatomical structure extracellular region
A, B, C, D, E	Iota toxin component Ib	-	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G	IPR035331	Clostridial binary toxin B/anthrax toxin PA, domain 3	Domain
G	IPR011658	PA14 domain	Domain
G	IPR027439	Protective antigen, heptamerisation domain	Domain
G	IPR035088	Protective antigen, Ca-binding domain	Domain
G	IPR037149	Protective antigen, heptamerisation domain superfamily	Homologous Superfamily
G	IPR003896	Bacterial exotoxin B	Family
F	IPR035331	Clostridial binary toxin B/anthrax toxin PA, domain 3	Domain
F	IPR011658	PA14 domain	Domain
F	IPR027439	Protective antigen, heptamerisation domain	Domain
F	IPR035088	Protective antigen, Ca-binding domain	Domain
F	IPR037149	Protective antigen, heptamerisation domain superfamily	Homologous Superfamily
F	IPR003896	Bacterial exotoxin B	Family
A, B, C, D, E	IPR035331	Clostridial binary toxin B/anthrax toxin PA, domain 3	Domain
A, B, C, D, E	IPR011658	PA14 domain	Domain
A, B, C, D, E	IPR027439	Protective antigen, heptamerisation domain	Domain
A, B, C, D, E	IPR035088	Protective antigen, Ca-binding domain	Domain
A, B, C, D, E	IPR037149	Protective antigen, heptamerisation domain superfamily	Homologous Superfamily
A, B, C, D, E	IPR003896	Bacterial exotoxin B	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.