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 9JM0 | pdb_00009jm0

retron Ec86-effector fiber

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
PBeta-Caspe9jm0P1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
KBeta-Caspe9jm0K1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
F [auth B]Beta-Caspe9jm0B1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
ABeta-Caspe9jm0A1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth F],
I,
O,
S		RNA (5'-R(P*CP*GP*UP*AP*AP*GP*GP*GP*UP*GP*CP*GP*CP*A)-3')---
D [auth E],
H,
N,
R		RNA (82-MER)---
C [auth D],
G,
M,
Q		DNA (85-MER)---
B [auth C],
J,
L,
T		Retron Ec86 putative ribosyltransferase/DNA-binding protein- - -
A,
F [auth B],
K,
P		Retron Ec86 reverse transcriptase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth C],
J,
L,
T		IPR049725STM3845 retron effector proteinFamily
A,
F [auth B],
K,
P		IPR000477Reverse transcriptase domainDomain
A,
F [auth B],
K,
P		IPR051083Group II Intron Splicing and Mobility/DefenseFamily
A,
F [auth B],
K,
P		IPR000123RNA-directed DNA polymerase (reverse transcriptase), msDNAFamily
A,
F [auth B],
K,
P		IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily