9JG9 | pdb_00009jg9

Structure of the BtpeA effector and BtaeB effector bound to the VgrG spike from the Type VI secretion system

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF14107Domain of unknown function (DUF4280) (DUF4280)Domain of unknown function (DUF4280)- Family
C [auth E],
D [auth F],
E [auth G]		PF04717Type VI secretion system/phage-baseplate injector OB domain (Phage_base_V)Type VI secretion system/phage-baseplate injector OB domainFamily of bacterial and phage baseplate assembly proteins responsible for forming the small spike at the end of the tail or bacterial pathogenic needle-shaft [1]. This entry represents the OB fold part of the structure. This structure contains an unu ...Family of bacterial and phage baseplate assembly proteins responsible for forming the small spike at the end of the tail or bacterial pathogenic needle-shaft [1]. This entry represents the OB fold part of the structure. This structure contains an unusual extra beta hairpin that forms the foundation of the spike protein's beta helix [3].
Domain
C [auth E],
D [auth F],
E [auth G]		PF05954Phage tail baseplate hub (GPD) (Phage_GPD)Phage tail baseplate hub (GPD)- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR025460Protein of unknown function DUF4280Family
A [auth B]IPR017483Conserved hypothetical protein CHP03034Family
C [auth E],
D [auth F],
E [auth G]		IPR006531Gp5/Type VI secretion system Vgr protein, OB-fold domainDomain
C [auth E],
D [auth F],
E [auth G]		IPR037026Vgr protein, OB-fold domain superfamilyHomologous Superfamily