9IPO | pdb_00009ipo

Hemichannel sub-structure of Cx36/GJD2 gap junction intercellular channel (FN conformation) in soybean polar lipid nanodiscs, treated with a 10-fold molar excess of carbenoxolone

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	Gap junction delta-2 protein,Soluble cytochrome b562	wide pore channel activity passive transmembrane transporter activity channel activity transporter activity gap junction channel activity transmembrane transporter activity binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity gap junction channel activity transmembrane transporter activity binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	multicellular organismal process system process nervous system process biological regulation action potential transmission of nerve impulse cell communication neuronal action potential cellular process regulation of biological quality regulation of membrane potential trans-synaptic signaling synaptic signaling regulation of biological process multicellular organismal process system process nervous system process biological regulation action potential transmission of nerve impulse cell communication neuronal action potential cellular process regulation of biological quality regulation of membrane potential trans-synaptic signaling synaptic signaling regulation of biological process signaling anterograde trans-synaptic signaling cell-cell signaling chemical synaptic transmission sensory perception of light stimulus sensory perception visual perception electron transport chain metabolic process generation of precursor metabolites and energy	cell-cell junction protein-containing complex anchoring junction plasma membrane protein complex gap junction membrane plasma membrane membrane protein complex cell periphery cellular anatomical structure cell junction connexin complex synapse periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR038359	Connexin, N-terminal domain superfamily	Homologous Superfamily
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR000500	Connexin	Family
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR019570	Connexin, cysteine-rich domain	Domain
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR013092	Connexin, N-terminal	Domain
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR002260	Gap junction delta-2 protein (Cx36)	Family
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR017990	Connexin, conserved site	Conserved Site
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR010980	Cytochrome c/b562	Homologous Superfamily
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	IPR009155	Cytochrome b562	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C [auth F], D [auth C], E [auth D], A, B, C [auth F], D [auth C], E [auth D], F [auth E]	Pharos: Q9UKL4	myopia Ametropia lung carcinoma osteosarcoma refractive error facioscapulohumeral muscular dystrophy malignant glioma ovarian cancer large cell medulloblastoma psoriasis schizophrenia

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.