Crystal structure of NodD-EBD (Effector Binding Domain) in complex with hesperetin from Rhizobium leguminosarum bv. vicae 3841
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Sec23_trunk | e9iibD1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Sec23_trunk | ECOD (v295.2) |
| C | Sec23_trunk | e9iibC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Sec23_trunk | ECOD (v295.2) |
| B | Sec23_trunk | e9iibB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Sec23_trunk | ECOD (v295.2) |
| A | Sec23_trunk | e9iibA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Sec23_trunk | ECOD (v295.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| LysR family transcriptional regulator |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050389 | HTH-type transcriptional regulator YidZ/Nodulation protein-like | Family | |
| IPR005119 | LysR, substrate-binding | Domain | |
| IPR000847 | LysR, HTH, N-terminal domain | Domain | |
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
| IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
| IPR037416 | Nodulation protein D, PBP2 | Domain |














