9I89 | pdb_00009i89

Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth 2]Large ribosomal subunit protein uL29
D [auth 5]Large ribosomal subunit protein bL32
G [auth 8]Large ribosomal subunit protein bL35
H [auth 9]Large ribosomal subunit protein bL36
I [auth B]5S ribosomal RNA---
J [auth C]Large ribosomal subunit protein uL24
K [auth D]fMet-P-tRNA---
L [auth G]Large ribosomal subunit protein uL2
M [auth H]Large ribosomal subunit protein uL3
N [auth I]Large ribosomal subunit protein uL4
Q [auth M]Large ribosomal subunit protein uL13
T [auth P]Large ribosomal subunit protein uL16
U [auth Q]Large ribosomal subunit protein bL17
V [auth R]Large ribosomal subunit protein uL18
W [auth S]Large ribosomal subunit protein bL19
Y [auth U]Large ribosomal subunit protein bL21
BA [auth Y]Large ribosomal subunit protein bL25
FA [auth e]Small ribosomal subunit protein uS4
GA [auth f]Small ribosomal subunit protein uS5
JA [auth j]Small ribosomal subunit protein uS9
KA [auth k]Small ribosomal subunit protein uS10
LA [auth l]Small ribosomal subunit protein uS11
MA [auth m]Small ribosomal subunit protein uS12
OA [auth o]Small ribosomal subunit protein uS14B
PA [auth p]Small ribosomal subunit protein uS15
SA [auth s]Small ribosomal subunit protein bS18
WA [auth a]16S ribosomal RNA---
XA [auth h]Small ribosomal subunit protein uS7
F [auth 7]Large ribosomal subunit protein bL34
YA [auth 4]Large ribosomal subunit protein bL31B
E [auth 6]Large ribosomal subunit protein bL33A
VA [auth A]23S ribosomal RNA---
UA [auth u]Small ribosomal subunit protein bS20
TA [auth t]Small ribosomal subunit protein uS19
RA [auth r]Small ribosomal subunit protein uS17
QA [auth q]Small ribosomal subunit protein bS16
NA [auth n]Small ribosomal subunit protein uS13
IA [auth i]Small ribosomal subunit protein uS8
HA [auth g]Small ribosomal subunit protein bS6
EA [auth d]Small ribosomal subunit protein uS3
DA [auth c]Small ribosomal subunit protein uS2
C [auth 3]Large ribosomal subunit protein uL30
CA [auth Z]Large ribosomal subunit protein bL27
AA [auth W]Large ribosomal subunit protein uL23
Z [auth V]Large ribosomal subunit protein uL22
X [auth T]Large ribosomal subunit protein bL20
S [auth O]Large ribosomal subunit protein uL15
R [auth N]Large ribosomal subunit protein uL14
P [auth K]Large ribosomal subunit protein uL6
O [auth J]Large ribosomal subunit protein uL5
A [auth 1]Large ribosomal subunit protein bL28

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth 2]IPR050063Universal ribosomal protein uL29Family
B [auth 2]IPR001854Large ribosomal subunit protein uL29Family
B [auth 2]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
D [auth 5]IPR002677Large ribosomal subunit protein bL32Family
D [auth 5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
D [auth 5]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
G [auth 8]IPR021137Large ribosomal subunit protein bL35-likeFamily
G [auth 8]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
G [auth 8]IPR001706Large ribosomal subunit protein bL35Family
G [auth 8]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
H [auth 9]IPR000473Large ribosomal subunit protein bL36Family
H [auth 9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
J [auth C]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
J [auth C]IPR003256Large ribosomal subunit protein uL24Family
J [auth C]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
J [auth C]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
J [auth C]IPR005824KOWDomain
J [auth C]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
J [auth C]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
L [auth G]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
L [auth G]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
L [auth G]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth G]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth G]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
L [auth G]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth G]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
L [auth G]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
L [auth G]IPR002171Large ribosomal subunit protein uL2Family
M [auth H]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
M [auth H]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
M [auth H]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
M [auth H]IPR000597Large ribosomal subunit protein uL3Family
N [auth I]IPR013005Large ribosomal subunit protein uL4-likeFamily
N [auth I]IPR002136Large ribosomal subunit protein uL4Family
N [auth I]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
Q [auth M]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
Q [auth M]IPR005822Large ribosomal subunit protein uL13Family
Q [auth M]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
Q [auth M]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
T [auth P]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
T [auth P]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
T [auth P]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
T [auth P]IPR016180Large ribosomal subunit protein uL16 domainDomain
T [auth P]IPR047873Large ribosomal subunit protein uL16Family
U [auth Q]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
U [auth Q]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
U [auth Q]IPR000456Large ribosomal subunit protein bL17Family
V [auth R]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
V [auth R]IPR057268Large ribosomal subunit protein uL18Family
V [auth R]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
W [auth S]IPR001857Large ribosomal subunit protein bL19Family
W [auth S]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
W [auth S]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
W [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth U]IPR028909Large ribosomal subunit protein bL21-likeFamily
Y [auth U]IPR001787Large ribosomal subunit protein bL21Family
Y [auth U]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
BA [auth Y]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
BA [auth Y]IPR001021Ribosomal protein bL25, long-formFamily
BA [auth Y]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
BA [auth Y]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
BA [auth Y]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
BA [auth Y]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
BA [auth Y]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
FA [auth e]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
FA [auth e]IPR002942RNA-binding S4 domainDomain
FA [auth e]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
FA [auth e]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
FA [auth e]IPR022801Small ribosomal subunit protein uS4Family
FA [auth e]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
GA [auth f]IPR000851Small ribosomal subunit protein uS5Family
GA [auth f]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
GA [auth f]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
GA [auth f]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
GA [auth f]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
GA [auth f]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
GA [auth f]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JA [auth j]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
JA [auth j]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
JA [auth j]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JA [auth j]IPR000754Small ribosomal subunit protein uS9Family
JA [auth j]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
KA [auth k]IPR001848Small ribosomal subunit protein uS10Family
KA [auth k]IPR027486Small ribosomal subunit protein uS10 domainDomain
KA [auth k]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
KA [auth k]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
LA [auth l]IPR001971Small ribosomal subunit protein uS11Family
LA [auth l]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
LA [auth l]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
LA [auth l]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
MA [auth m]IPR006032Small ribosomal subunit protein uS12Family
MA [auth m]IPR005679Ribosomal protein uS12, bacteriaFamily
MA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OA [auth o]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
OA [auth o]IPR001209Small ribosomal subunit protein uS14Family
OA [auth o]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
OA [auth o]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
PA [auth p]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
PA [auth p]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
PA [auth p]IPR000589Small ribosomal subunit protein uS15Family
SA [auth s]IPR001648Small ribosomal subunit protein bS18Family
SA [auth s]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
SA [auth s]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
XA [auth h]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
XA [auth h]IPR000235Small ribosomal subunit protein uS7Family
XA [auth h]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
XA [auth h]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
XA [auth h]IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth 7]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
F [auth 7]IPR000271Large ribosomal subunit protein bL34Family
YA [auth 4]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
YA [auth 4]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
YA [auth 4]IPR027493Large ribosomal subunit protein bL31 type BFamily
YA [auth 4]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
E [auth 6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
E [auth 6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
E [auth 6]IPR001705Large ribosomal subunit protein bL33Family
E [auth 6]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
UA [auth u]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
UA [auth u]IPR002583Small ribosomal subunit protein bS20Family
TA [auth t]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
TA [auth t]IPR002222Small ribosomal subunit protein uS19Family
TA [auth t]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
TA [auth t]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
RA [auth r]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
RA [auth r]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
RA [auth r]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RA [auth r]IPR000266Small ribosomal subunit protein uS17Family
QA [auth q]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
QA [auth q]IPR000307Small ribosomal subunit protein bS16Family
NA [auth n]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
NA [auth n]IPR001892Small ribosomal subunit protein uS13Family
NA [auth n]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
NA [auth n]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
NA [auth n]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
IA [auth i]IPR000630Small ribosomal subunit protein uS8Family
IA [auth i]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
IA [auth i]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
HA [auth g]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
HA [auth g]IPR000529Small ribosomal subunit protein bS6Family
HA [auth g]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
HA [auth g]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
HA [auth g]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
EA [auth d]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
EA [auth d]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
EA [auth d]IPR057258Small ribosomal subunit protein uS3Family
EA [auth d]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
EA [auth d]IPR004087K Homology domainDomain
EA [auth d]IPR004044K Homology domain, type 2Domain
EA [auth d]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
EA [auth d]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
EA [auth d]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth c]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
DA [auth c]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
DA [auth c]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
DA [auth c]IPR001865Small ribosomal subunit protein uS2Family
C [auth 3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
C [auth 3]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
C [auth 3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
CA [auth Z]IPR001684Large ribosomal subunit protein bL27Family
CA [auth Z]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
AA [auth W]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth W]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
AA [auth W]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth V]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
Z [auth V]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
Z [auth V]IPR001063Large ribosomal subunit protein uL22Family
Z [auth V]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
Z [auth V]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
X [auth T]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
X [auth T]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
X [auth T]IPR005813Large ribosomal subunit protein bL20Family
S [auth O]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth O]IPR030878Large ribosomal subunit protein uL15Family
S [auth O]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
S [auth O]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
S [auth O]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
R [auth N]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
R [auth N]IPR000218Large ribosomal subunit protein uL14Family
R [auth N]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
R [auth N]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
P [auth K]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
P [auth K]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
P [auth K]IPR000702Large ribosomal subunit protein uL6-likeFamily
P [auth K]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
P [auth K]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
O [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
O [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
O [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
O [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
O [auth J]IPR002132Large ribosomal subunit protein uL5Family
O [auth J]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
A [auth 1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
A [auth 1]IPR050096Bacterial ribosomal protein bL28Family
A [auth 1]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
A [auth 1]IPR026569Large ribosomal subunit protein bL28Family
A [auth 1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily