Cryo-EM structure of HIGD2A bound complex IV
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth H] | SCOP2B Superfamily | Cytochrome c oxidase subunit h | 8094433 | 3000395 | SCOP2B (2022-06-29) |
| H [auth G] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIa | 8094056 | 3000592 | SCOP2B (2022-06-29) |
| G [auth F] | SCOP2B Superfamily | Rubredoxin-like | 8093876 | 3001257 | SCOP2B (2022-06-29) |
| F [auth E] | SCOP2B Superfamily | Cytochrome c oxidase subunit E | 8094335 | 3001402 | SCOP2B (2022-06-29) |
| E [auth D] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit IV | 8093930 | 3000582 | SCOP2B (2022-06-29) |
| D [auth C] | SCOP2B Superfamily | Cytochrome c oxidase subunit III-like | 8094417 | 3000671 | SCOP2B (2022-06-29) |
| B [auth A] | SCOP2B Superfamily | Cytochrome c oxidase subunit I-like | 8094379 | 3000653 | SCOP2B (2022-06-29) |
| N [auth M] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) | 8095689 | 3000633 | SCOP2B (2022-06-29) |
| M [auth L] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) | 8094535 | 3000624 | SCOP2B (2022-06-29) |
| L [auth K] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIb | 8094463 | 3000613 | SCOP2B (2022-06-29) |
| K [auth J] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIa | 8094110 | 3000606 | SCOP2B (2022-06-29) |
| J [auth I] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIc | 8093998 | 3000598 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth H] | PF02297 | Cytochrome oxidase c subunit VIb (COX6B) | Cytochrome oxidase c subunit VIb | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. | Domain |
| D [auth C] | PF00510 | Cytochrome c oxidase subunit III (COX3) | Cytochrome c oxidase subunit III | Domain | |
| C [auth B] | PF00116 | Cytochrome C oxidase subunit II, periplasmic domain (COX2) | Cytochrome C oxidase subunit II, periplasmic domain | Domain | |
| C [auth B] | PF02790 | Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM) | Cytochrome C oxidase subunit II, transmembrane domain | - | Family |
| B [auth A] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
| N [auth M] | PF02285 | Cytochrome oxidase c subunit VIII (COX8) | Cytochrome oxidase c subunit VIII | - | Family |
| K [auth J] | PF02238 | Cytochrome c oxidase subunit VII (COX7a) | Cytochrome c oxidase subunit VII | - | Family |
| J [auth I] | PF02937 | Cytochrome c oxidase subunit VIc (COX6C) | Cytochrome c oxidase subunit VIc | - | Family |
| A [auth N] | PF04588 | Hypoxia induced protein conserved region (HIG_1_N) | Hypoxia induced protein conserved region | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| D [auth C] | FME | Parent Component: MET :  AA0021 , AA0566 :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
| B [auth A] | FME | Parent Component: MET :  AA0021 , AA0566 , AA0021 , AA0566 :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |














