9HQC | pdb_00009hqc

Partial (54mer) encapsulin shell assembly from Mycobacterium tuberculosis

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth FB]	Beta-Casp	e9hqcFB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Z [auth DA]	Beta-Casp	e9hqcDA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
YA [auth DB]	Beta-Casp	e9hqcDB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Y [auth CA]	Beta-Casp	e9hqcCA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
XA [auth BB]	Beta-Casp	e9hqcBB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
X [auth BA]	Beta-Casp	e9hqcBA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
WA [auth AB]	Beta-Casp	e9hqcAB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
W [auth Z]	Beta-Casp	e9hqcZ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
VA [auth ZA]	Beta-Casp	e9hqcZA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
V [auth X]	Beta-Casp	e9hqcX1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
UA [auth YA]	Beta-Casp	e9hqcYA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
U [auth W]	Beta-Casp	e9hqcW1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
TA [auth XA]	Beta-Casp	e9hqcXA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
T [auth V]	Beta-Casp	e9hqcV1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
SA [auth WA]	Beta-Casp	e9hqcWA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
S [auth U]	Beta-Casp	e9hqcU1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
RA [auth VA]	Beta-Casp	e9hqcVA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
R [auth T]	Beta-Casp	e9hqcT1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
QA [auth UA]	Beta-Casp	e9hqcUA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Q [auth S]	Beta-Casp	e9hqcS1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
PA [auth TA]	Beta-Casp	e9hqcTA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
P [auth R]	Beta-Casp	e9hqcR1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
OA [auth SA]	Beta-Casp	e9hqcSA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
O [auth Q]	Beta-Casp	e9hqcQ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
NA [auth RA]	Beta-Casp	e9hqcRA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
N [auth P]	Beta-Casp	e9hqcP1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
MA [auth QA]	Beta-Casp	e9hqcQA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
M [auth O]	Beta-Casp	e9hqcO1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
LA [auth PA]	Beta-Casp	e9hqcPA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
L [auth N]	Beta-Casp	e9hqcN1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
KA [auth OA]	Beta-Casp	e9hqcOA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
K [auth M]	Beta-Casp	e9hqcM1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
JA [auth NA]	Beta-Casp	e9hqcNA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
J [auth L]	Beta-Casp	e9hqcL1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
IA [auth MA]	Beta-Casp	e9hqcMA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
I [auth K]	Beta-Casp	e9hqcK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
HA [auth LA]	Beta-Casp	e9hqcLA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
H [auth I]	Beta-Casp	e9hqcI1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
GA [auth KA]	Beta-Casp	e9hqcKA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
G [auth H]	Beta-Casp	e9hqcH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
FA [auth JA]	Beta-Casp	e9hqcJA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
F [auth G]	Beta-Casp	e9hqcG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
EA [auth IA]	Beta-Casp	e9hqcIA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
E [auth F]	Beta-Casp	e9hqcF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
DA [auth HA]	Beta-Casp	e9hqcHA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
D [auth E]	Beta-Casp	e9hqcE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
CA [auth GA]	Beta-Casp	e9hqcGA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
C [auth D]	Beta-Casp	e9hqcD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
BB [auth HB]	Beta-Casp	e9hqcHB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
BA [auth FA]	Beta-Casp	e9hqcFA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
B [auth C]	Beta-Casp	e9hqcC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
AB [auth GB]	Beta-Casp	e9hqcGB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
AA [auth EA]	Beta-Casp	e9hqcEA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
A	Beta-Casp	e9hqcA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], BB [auth HB], C [auth D], CA [auth GA], D [auth E], DA [auth HA], E [auth F], EA [auth IA], F [auth G], FA [auth JA], G [auth H], GA [auth KA], H [auth I], HA [auth LA], I [auth K], IA [auth MA], J [auth L], JA [auth NA], K [auth M], KA [auth OA], L [auth N], LA [auth PA], M [auth O], MA [auth QA], N [auth P], NA [auth RA], O [auth Q], OA [auth SA], P [auth R], PA [auth TA], Q [auth S], QA [auth UA], R [auth T], RA [auth VA], S [auth U], SA [auth WA], T [auth V], TA [auth XA], U [auth W], UA [auth YA], V [auth X], VA [auth ZA], W [auth Z], WA [auth AB], X [auth BA], XA [auth BB], Y [auth CA], YA [auth DB], Z [auth DA], ZA [auth FB]	PF04454	Encapsulating protein for peroxidase (Linocin_M18)	Encapsulating protein for peroxidase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], BB [auth HB], C [auth D], CA [auth GA], D [auth E], DA [auth HA], E [auth F], EA [auth IA], F [auth G], FA [auth JA], G [auth H], GA [auth KA], H [auth I], HA [auth LA], I [auth K], IA [auth MA], J [auth L], JA [auth NA], K [auth M], KA [auth OA], L [auth N], LA [auth PA], M [auth O], MA [auth QA], N [auth P], NA [auth RA], O [auth Q], OA [auth SA], P [auth R], PA [auth TA], Q [auth S], QA [auth UA], R [auth T], RA [auth VA], S [auth U], SA [auth WA], T [auth V], TA [auth XA], U [auth W], UA [auth YA], V [auth X], VA [auth ZA], W [auth Z], WA [auth AB], X [auth BA], XA [auth BB], Y [auth CA], YA [auth DB], Z [auth DA], ZA [auth FB]	Type 1 encapsulin shell protein	-	-	cell periphery cellular anatomical structure plasma membrane membrane extracellular region intracellular organelle intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle encapsulin nanocompartment

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], BB [auth HB], C [auth D], CA [auth GA], D [auth E], DA [auth HA], E [auth F], EA [auth IA], F [auth G], FA [auth JA], G [auth H], GA [auth KA], H [auth I], HA [auth LA], I [auth K], IA [auth MA], J [auth L], JA [auth NA], K [auth M], KA [auth OA], L [auth N], LA [auth PA], M [auth O], MA [auth QA], N [auth P], NA [auth RA], O [auth Q], OA [auth SA], P [auth R], PA [auth TA], Q [auth S], QA [auth UA], R [auth T], RA [auth VA], S [auth U], SA [auth WA], T [auth V], TA [auth XA], U [auth W], UA [auth YA], V [auth X], VA [auth ZA], W [auth Z], WA [auth AB], X [auth BA], XA [auth BB], Y [auth CA], YA [auth DB], Z [auth DA], ZA [auth FB]	IPR007544	Type 1 encapsulin shell protein	Family
A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], A, AA [auth EA], AB [auth GB], B [auth C], BA [auth FA], BB [auth HB], C [auth D], CA [auth GA], D [auth E], DA [auth HA], E [auth F], EA [auth IA], F [auth G], FA [auth JA], G [auth H], GA [auth KA], H [auth I], HA [auth LA], I [auth K], IA [auth MA], J [auth L], JA [auth NA], K [auth M], KA [auth OA], L [auth N], LA [auth PA], M [auth O], MA [auth QA], N [auth P], NA [auth RA], O [auth Q], OA [auth SA], P [auth R], PA [auth TA], Q [auth S], QA [auth UA], R [auth T], RA [auth VA], S [auth U], SA [auth WA], T [auth V], TA [auth XA], U [auth W], UA [auth YA], V [auth X], VA [auth ZA], W [auth Z], WA [auth AB], X [auth BA], XA [auth BB], Y [auth CA], YA [auth DB], Z [auth DA], ZA [auth FB]	IPR051429	Encapsulin nanocompartment	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.