9HMF | pdb_00009hmf

Periplasmic scaffold of the Campylobacter jejuni flagellar motor (alpha carbon trace)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth O], B [auth P], C [auth Q], D [auth R]	PF03748	Flagellar basal body-associated protein FliL (FliL)	Flagellar basal body-associated protein FliL	-	Family
F [auth L]	PF13432	Tetratricopeptide repeat (TPR_16)	Tetratricopeptide repeat	-	Repeat
G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J]	PF13180	PDZ domain (PDZ_2)	PDZ domain		Domain
G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J]	PF17820	PDZ domain (PDZ_6)	PDZ domain	This entry represents the PDZ domain from a wide variety of proteins.	Domain
Q [auth M], R [auth N]	PF00691	OmpA family (OmpA)	OmpA family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth O], B [auth P], C [auth Q], D [auth R]	Flagellar protein FliL	-	chemotaxis response to stimulus taxis response to chemical response to external stimulus locomotion bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell periphery cellular anatomical structure plasma membrane membrane bacterial-type flagellum basal body cell projection organelle membraneless organelle bacterial-type flagellum
E [auth K]	Paralyzed flagella protein PflA	-	-	-
F [auth L]	TPR domain protein	-	-	cellular anatomical structure membrane
G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J]	PDZ domain-containing protein	-	-	-
N [auth C], O [auth B], P [auth A]	Lipoprotein, putative	-	-	-
Q [auth M], R [auth N]	Chemotaxis protein MotB, putative	-	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth O], B [auth P], C [auth Q], D [auth R]	IPR005503	Flagellar basal body-associated protein FliL	Family
E [auth K]	IPR055917	Domain of unknown function DUF7494	Domain
E [auth K]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
E [auth K]	IPR019734	Tetratricopeptide repeat	Repeat
F [auth L]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
F [auth L]	IPR019734	Tetratricopeptide repeat	Repeat
F [auth L]	IPR051012	Cellulose Synthase/LPS Assembly/PSI Assembly	Family
G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J]	IPR041489	PDZ domain 6	Domain
G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J]	IPR001478	PDZ domain	Domain
G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J]	IPR055911	Domain of unknown function DUF7488	Domain
G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J]	IPR036034	PDZ superfamily	Homologous Superfamily
N [auth C], O [auth B], P [auth A]	IPR038180	FlgT, N-terminal domain superfamily	Homologous Superfamily
N [auth C], O [auth B], P [auth A]	IPR007293	Flagellar protein FlgP	Family
Q [auth M], R [auth N]	IPR006665	OmpA-like domain	Domain
Q [auth M], R [auth N]	IPR025713	Motility protein B-like, N-terminal domain	Domain
Q [auth M], R [auth N]	IPR050330	Bacterial Outer Membrane Structural/Functional	Family
Q [auth M], R [auth N]	IPR036737	OmpA-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.