9HFL | pdb_00009hfl

Cryo-EM structure of the human snRNA export complex comprising CBC-PHAX-CRM1-RanGTP and capped-RNA

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	RNA-binding domain, RBD	8042382	3000110	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ARM repeat-like	8042371	3000116	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ARM repeat-like	8042374	3000116	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ARM repeat-like	8042373	3000116	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ras-like P-loop GTPases	8057412	3002022	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ARM repeat-like	8043363	3000116	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D	PF00076	RNA recognition motif (RRM_1)	RNA recognition motif	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.	Domain
C	PF09088	MIF4G like (MIF4G_like)	MIF4G like	-	Repeat
C	PF09090	MIF4G like (MIF4G_like_2)	MIF4G like	-	Repeat
C	PF02854	MIF4G domain (MIF4G)	MIF4G domain	-	Repeat
B	PF00071	Ras family (Ras)	Ras family	Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ...	Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].	Domain
A	PF08389	Exportin 1-like protein (Xpo1)	Exportin 1-like protein	-	Repeat
A	PF18784	CRM1 / Exportin repeat 2 (CRM1_repeat_2)	CRM1 / Exportin repeat 2	-	Repeat
A	PF18777	Chromosome region maintenance or exportin repeat (CRM1_repeat)	Chromosome region maintenance or exportin repeat	-	Repeat
A	PF18787	CRM1 / Exportin repeat 3 (CRM1_repeat_3)	CRM1 / Exportin repeat 3	-	Repeat
A	PF03810	Importin-beta N-terminal domain (IBN_N)	Importin-beta N-terminal domain	-	Repeat
A	PF08767	CRM1 C terminal (CRM1_C)	CRM1 C terminal	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth R]	RNA (5'-D((ADM))-R(PA)-3')	-	-	-
E [auth N], F [auth P]	Phosphorylated adapter RNA export protein	mRNA cap binding complex binding protein-containing complex binding binding toxic substance binding RNA binding nucleic acid binding	localization establishment of protein localization nitrogen compound transport protein transport transport macromolecule localization intracellular protein localization establishment of localization regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process localization establishment of protein localization nitrogen compound transport protein transport transport macromolecule localization intracellular protein localization establishment of localization regulation of cellular process catabolic process negative regulation of biological process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process negative regulation of macromolecule metabolic process negative regulation of catabolic process regulation of biosynthetic process regulation of biological process negative regulation of metabolic process biological regulation negative regulation of RNA catabolic process primary metabolic process regulation of macromolecule metabolic process regulation of catabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound catabolic process RNA stabilization regulation of gene expression biosynthetic process regulation of RNA stability nucleic acid catabolic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of RNA metabolic process cellular localization RNA transport nucleocytoplasmic transport snRNA export from nucleus nuclear transport nucleic acid transport intracellular transport RNA export from nucleus establishment of RNA localization establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport snRNA transport	membrane-bounded organelle Cajal body intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen ribonucleoprotein granule intracellular organelle nuclear body cellular anatomical structure nucleoplasm organelle lumen membrane-bounded organelle Cajal body intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen ribonucleoprotein granule intracellular organelle nuclear body cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle supramolecular complex nuclear ribonucleoprotein granule nuclear lumen cytoplasm cytosol somatodendritic compartment cell body neuronal cell body protein-containing complex ribonucleoprotein complex
D	Nuclear cap-binding protein subunit 2	RNA binding binding nucleic acid binding RNA cap binding DNA binding snRNA binding mRNA binding RNA 7-methylguanosine cap binding	regulation of cellular process positive regulation of biological process RNA metabolic process mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process RNA 3'-end processing regulation of nucleobase-containing compound metabolic process RNA processing regulation of cellular process positive regulation of biological process RNA metabolic process mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process RNA 3'-end processing regulation of nucleobase-containing compound metabolic process RNA processing positive regulation of cellular process regulation of mRNA processing regulation of biological process mRNA 3'-end processing biological regulation regulation of mRNA 3'-end processing positive regulation of mRNA metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process biosynthetic process positive regulation of mRNA processing metabolic process cellular process macromolecule metabolic process positive regulation of mRNA 3'-end processing regulation of mRNA metabolic process regulation of metabolic process RNA splicing RNA splicing, via transesterification reactions mRNA cis splicing, via spliceosome mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of localization cellular localization nitrogen compound transport nucleocytoplasmic transport transport positive regulation of nucleocytoplasmic transport nuclear transport positive regulation of nucleobase-containing compound transport localization positive regulation of RNA export from nucleus establishment of localization in cell positive regulation of intracellular transport RNA localization nuclear export nucleobase-containing compound transport regulation of intracellular transport RNA transport regulation of transport regulation of nucleobase-containing compound transport regulation of RNA export from nucleus nucleic acid transport intracellular transport regulation of nucleocytoplasmic transport establishment of localization RNA export from nucleus establishment of RNA localization positive regulation of transport regulation of cellular localization macromolecule localization negative regulation of biological process post-transcriptional regulation of gene expression negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of metabolic process regulatory ncRNA-mediated post-transcriptional gene silencing regulatory ncRNA-mediated gene silencing regulation of gene expression negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process post-transcriptional gene silencing regulation of macromolecule biosynthetic process mRNA transport mRNA export from nucleus cap-dependent translational initiation translation protein biosynthetic process cytoplasmic translation cytoplasmic translational initiation translational initiation protein metabolic process histone mRNA metabolic process regulation of translational initiation regulation of protein metabolic process regulation of translation mRNA transcription by RNA polymerase II mRNA transcription DNA-templated transcription transcription by RNA polymerase II regulatory ncRNA processing primary miRNA processing miRNA processing transcription elongation by RNA polymerase II positive regulation of DNA-templated transcription positive regulation of transcription elongation by RNA polymerase II positive regulation of macromolecule biosynthetic process positive regulation of biosynthetic process positive regulation of DNA-templated transcription, elongation regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of DNA-templated transcription elongation regulation of transcription elongation by RNA polymerase II positive regulation of transcription by RNA polymerase II DNA-templated transcription elongation positive regulation of RNA biosynthetic process regulation of DNA-templated transcription catabolic process nuclear-transcribed mRNA catabolic process, nonsense-mediated decay macromolecule catabolic process RNA catabolic process mRNA catabolic process nuclear-transcribed mRNA catabolic process nucleobase-containing compound catabolic process nucleic acid catabolic process miRNA-mediated post-transcriptional gene silencing alternative mRNA splicing, via spliceosome snRNA export from nucleus snRNA transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex RNA cap binding complex intracellular protein-containing complex membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex RNA cap binding complex intracellular protein-containing complex membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen nuclear cap binding complex intracellular membraneless organelle cilium plasma membrane bounded cell projection ciliary basal body cell projection microtubule organizing center cytoskeleton membraneless organelle microtubule cytoskeleton
C	Nuclear cap-binding protein subunit 1	RNA binding binding nucleic acid binding RNA cap binding mRNA binding RNA 7-methylguanosine cap binding molecular adaptor activity	regulation of growth regulation of biological process regulation of cellular process regulation of cellular component organization biological regulation growth positive regulation of biological process positive regulation of cell growth regulation of cell growth cell growth cellular component organization positive regulation of growth cellular process cellular component organization or biogenesis regulation of growth regulation of biological process regulation of cellular process regulation of cellular component organization biological regulation growth positive regulation of biological process positive regulation of cell growth regulation of cell growth cell growth cellular component organization positive regulation of growth cellular process cellular component organization or biogenesis positive regulation of cellular process RNA metabolic process mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process RNA 3'-end processing regulation of nucleobase-containing compound metabolic process RNA processing regulation of mRNA processing mRNA 3'-end processing regulation of mRNA 3'-end processing positive regulation of mRNA metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process biosynthetic process positive regulation of mRNA processing metabolic process macromolecule metabolic process positive regulation of mRNA 3'-end processing regulation of mRNA metabolic process regulation of metabolic process negative regulation of biological process post-transcriptional regulation of gene expression negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of metabolic process regulatory ncRNA-mediated post-transcriptional gene silencing regulatory ncRNA-mediated gene silencing regulation of gene expression negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process post-transcriptional gene silencing regulation of macromolecule biosynthetic process cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport intracellular transport establishment of localization RNA export from nucleus establishment of RNA localization macromolecule localization cap-dependent translational initiation translation protein biosynthetic process cytoplasmic translation cytoplasmic translational initiation translational initiation protein metabolic process positive regulation of molecular function regulation of molecular function positive regulation of RNA binding regulation of binding positive regulation of binding catabolic process macromolecule catabolic process nucleobase-containing compound catabolic process nucleic acid catabolic process RNA catabolic process RNA splicing ribonucleoprotein complex biogenesis protein-RNA complex assembly cellular component biogenesis spliceosomal complex assembly protein-RNA complex organization cellular component assembly protein-containing complex assembly protein-containing complex organization RNA splicing, via transesterification reactions mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile histone mRNA metabolic process regulation of translational initiation regulation of protein metabolic process regulation of translation mRNA transcription by RNA polymerase II mRNA transcription DNA-templated transcription transcription by RNA polymerase II regulatory ncRNA processing primary miRNA processing miRNA processing transcription elongation by RNA polymerase II positive regulation of DNA-templated transcription positive regulation of transcription elongation by RNA polymerase II positive regulation of macromolecule biosynthetic process positive regulation of biosynthetic process positive regulation of DNA-templated transcription, elongation regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of DNA-templated transcription elongation regulation of transcription elongation by RNA polymerase II positive regulation of transcription by RNA polymerase II DNA-templated transcription elongation positive regulation of RNA biosynthetic process regulation of DNA-templated transcription 7-methylguanosine mRNA capping 7-methylguanosine RNA capping RNA capping RNA 5'-end processing nuclear-transcribed mRNA catabolic process, nonsense-mediated decay mRNA catabolic process nuclear-transcribed mRNA catabolic process biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus miRNA-mediated post-transcriptional gene silencing alternative mRNA splicing, via spliceosome snRNA export from nucleus snRNA transport regulation of mRNA splicing, via spliceosome positive regulation of mRNA splicing, via spliceosome regulation of RNA splicing positive regulation of gene expression positive regulation of RNA splicing	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol protein-containing complex RNA cap binding complex intracellular protein-containing complex nucleus membrane-enclosed lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol protein-containing complex RNA cap binding complex intracellular protein-containing complex nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen nuclear cap binding complex ribonucleoprotein complex
B	GTP-binding nuclear protein Ran	cell adhesion molecule binding cadherin binding protein binding binding protein-containing complex binding dynein intermediate chain binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity protein domain specific binding cell adhesion molecule binding cadherin binding protein binding binding protein-containing complex binding dynein intermediate chain binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity protein domain specific binding chromatin binding protein heterodimerization activity protein dimerization activity RNA binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding magnesium ion binding metal ion binding GDP binding G protein activity molecular function regulator activity importin-alpha family protein binding	cellular localization establishment of protein localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport intracellular transport protein export from nucleus establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process cellular localization establishment of protein localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport intracellular transport protein export from nucleus establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization nuclear export intracellular protein transport viral process cell division protein localization to nucleus import into nucleus establishment of protein localization to organelle protein localization to organelle protein import into nucleus cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization regulation of localization regulation of cellular process regulation of protein localization positive regulation of nucleocytoplasmic transport positive regulation of biological process positive regulation of establishment of protein localization regulation of protein localization to nucleus positive regulation of protein transport regulation of protein import into nucleus positive regulation of intracellular transport positive regulation of cellular process regulation of intracellular transport regulation of biological process regulation of transport positive regulation of protein localization to nucleus biological regulation regulation of establishment of protein localization positive regulation of protein import into nucleus regulation of nucleocytoplasmic transport regulation of protein transport positive regulation of transport regulation of cellular localization positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport developmental process spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation male gamete generation cell differentiation anatomical structure development germ cell development nucleobase-containing compound metabolic process metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process GTP metabolic process carbohydrate derivative metabolic process nucleotide metabolic process purine-containing compound metabolic process purine nucleotide metabolic process ribonucleotide metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process phosphate-containing compound metabolic process small molecule metabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process phosphorus metabolic process regulation of protein binding positive regulation of molecular function regulation of molecular function positive regulation of protein binding regulation of binding positive regulation of binding cellular response to stimulus cellular response to mineralocorticoid stimulus response to lipid response to stimulus response to endogenous stimulus response to mineralocorticoid cellular response to corticosteroid stimulus cellular response to endogenous stimulus response to corticosteroid cellular response to chemical stimulus response to hormone response to chemical response to steroid hormone cellular response to lipid cellular response to steroid hormone stimulus cellular response to hormone stimulus cell cycle mitotic cell cycle multicellular organismal process head development forebrain development animal organ development brain development nervous system development pallium development multicellular organism development central nervous system development telencephalon development hippocampus development limbic system development system development negative regulation of biological process post-transcriptional regulation of gene expression negative regulation of cellular process RNA localization nucleobase-containing compound transport negative regulation of macromolecule metabolic process regulation of biosynthetic process RNA transport negative regulation of metabolic process nucleic acid transport pre-miRNA export from nucleus regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulatory ncRNA-mediated post-transcriptional gene silencing RNA export from nucleus regulatory ncRNA-mediated gene silencing miRNA-mediated post-transcriptional gene silencing regulation of gene expression negative regulation of gene expression establishment of RNA localization biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process post-transcriptional gene silencing regulation of macromolecule biosynthetic process regulation of metabolic process establishment of organelle localization ribonucleoprotein complex biogenesis ribosomal subunit export from nucleus cellular component biogenesis ribosome biogenesis ribosomal small subunit export from nucleus organelle localization ribosome localization ribosomal large subunit export from nucleus mitotic nuclear division organelle fission chromosome organization sister chromatid segregation nuclear division mitotic cell cycle process mitotic sister chromatid segregation nuclear chromosome segregation chromosome segregation cell cycle process protein localization to nucleolus microtubule cytoskeleton organization mitotic spindle organization microtubule-based process microtubule cytoskeleton organization involved in mitosis spindle organization RNA import into nucleus snRNA import into nucleus snRNA transport	cellular anatomical structure membrane protein-containing complex nucleocytoplasmic transport complex RNA nuclear export complex membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system cellular anatomical structure membrane protein-containing complex nucleocytoplasmic transport complex RNA nuclear export complex membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cytoplasm cytosol cell projection cilium 9+2 motile cilium sperm flagellum motile cilium plasma membrane bounded cell projection nuclear protein-containing complex nuclear pore membraneless organelle intracellular membraneless organelle chromatin chromosome endosome intracellular vesicle recycling endosome cytoplasmic vesicle male germ cell nucleus germ cell nucleus midbody membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen nuclear lumen pigment granule melanosome microtubule organizing center cytoskeleton centriole microtubule cytoskeleton nucleoplasm manchette
A	Exportin-1	small GTPase binding protein binding binding enzyme binding GTPase binding protein domain specific binding RNA binding nucleic acid binding nucleocytoplasmic carrier activity nuclear export signal receptor activity molecular carrier activity transcription factor binding DNA-binding transcription factor binding	response to stimulus response to chemical response to xenobiotic stimulus cellular response to stimulus cellular response to chemical stimulus cellular response to salt cellular process response to salt establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport response to stimulus response to chemical response to xenobiotic stimulus cellular response to stimulus cellular response to chemical stimulus cellular response to salt cellular process response to salt establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport ribosomal subunit export from nucleus intracellular transport establishment of localization cellular component biogenesis localization ribosome biogenesis ribosomal small subunit export from nucleus organelle localization establishment of localization in cell cellular component organization or biogenesis nuclear export ribosome localization establishment of protein localization nitrogen compound transport protein export from nucleus protein transport macromolecule localization intracellular protein localization intracellular protein transport mRNA transport mRNA export from nucleus RNA localization nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process regulation of biological process microtubule organizing center organization regulation of cellular process regulation of cellular component organization regulation of centrosome cycle regulation of cell cycle process microtubule cytoskeleton organization biological regulation regulation of microtubule-based process cellular component organization centrosome duplication organelle organization centrosome cycle regulation of centrosome duplication microtubule-based process cell cycle regulation of cell cycle cytoskeleton organization cell cycle process regulation of localization regulation of protein localization regulation of protein export from nucleus regulation of intracellular transport regulation of transport regulation of establishment of protein localization regulation of nucleocytoplasmic transport regulation of protein transport regulation of cellular localization regulation of intracellular protein transport ribosomal large subunit export from nucleus catabolic process proteolysis involved in protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of ubiquitin-dependent protein catabolic process regulation of primary metabolic process regulation of proteolysis involved in protein catabolic process regulation of proteolysis modification-dependent macromolecule catabolic process proteolysis protein metabolic process regulation of protein metabolic process primary metabolic process proteasomal protein catabolic process protein catabolic process regulation of macromolecule metabolic process regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process regulation of proteasomal protein catabolic process ubiquitin-dependent protein catabolic process regulation of metabolic process regulation of protein catabolic process negative regulation of biological process RNA metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process response to lipid response to oxygen-containing compound response to triglyceride cellular response to oxygen-containing compound cellular response to triglyceride cellular response to lipid protein localization to organelle protein localization to nucleus	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane organelle envelope nuclear envelope endomembrane system nuclear membrane organelle membrane cytoplasm cytosol nucleoplasm protein-containing complex chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome Cajal body ribonucleoprotein granule nuclear body nuclear ribonucleoprotein granule ribonucleoprotein complex nuclear outer membrane-endoplasmic reticulum membrane network annulate lamellae

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth N], F [auth P]	IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	Homologous Superfamily
E [auth N], F [auth P]	IPR039047	Phosphorylated adapter RNA export protein	Family
E [auth N], F [auth P]	IPR019385	Phosphorylated adapter RNA export protein, RNA-binding domain	Domain
D	IPR034148	NCBP2, RNA recognition motif	Domain
D	IPR000504	RNA recognition motif domain	Domain
D	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
D	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
D	IPR027157	Nuclear cap-binding protein subunit 2	Family
C	IPR016024	Armadillo-type fold	Homologous Superfamily
C	IPR015172	MIF4G-like, type 1	Domain
C	IPR027159	Nuclear cap-binding protein subunit 1	Family
C	IPR015174	MIF4G-like, type 2	Domain
C	IPR003890	MIF4G-like, type 3	Domain
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR002041	Ran GTPase	Family
B	IPR005225	Small GTP-binding domain	Domain
B	IPR001806	Small GTPase	Family
A	IPR041123	Chromosome region maintenance repeat	Repeat
A	IPR016024	Armadillo-type fold	Homologous Superfamily
A	IPR041235	Exportin-1, repeat 2	Repeat
A	IPR001494	Importin-beta, N-terminal domain	Domain
A	IPR011989	Armadillo-like helical	Homologous Superfamily
A	IPR045065	Exportin-1/5	Family
A	IPR013598	Exportin-1/Importin-beta-like	Domain
A	IPR014877	Exportin-1, C-terminal	Domain
A	IPR040485	Exportin-1, repeat 3	Repeat

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
E [auth N], F [auth P]	Pharos: Q9H814	atypical teratoid rhabdoid tumor exocrine pancreatic carcinoma glioblastoma malignant pancreatic neoplasm colorectal cancer gastric cancer hepatocellular carcinoma osteoporosis diabetes mellitus gastric carcinoma large cell medulloblastoma ovarian cancer
D	Pharos: P52298	astrocytic tumor lung adenocarcinoma myopathy breast cancer lung cancer non-small cell lung carcinoma breast carcinoma medulloblastoma ovarian cancer
C	Pharos: Q09161	Barrett esophagus esophageal adenocarcinoma malignant ependymoma myopathy thyroid gland carcinoma breast cancer Hashimoto thyroiditis malignant mesothelioma non-small cell lung carcinoma tuberculosis breast carcinoma hypothyroidism medulloblastoma pancreatic intraductal papillary-mucinous carcinoma
B	Pharos: P62826	keloid carcinoma HIV infectious disease Mammary Neoplasms, Experimental sarcomatoid carcinoma pemphigus undifferentiated carcinoma acute myeloid leukemia mammary neoplasms, animal nasopharyngeal carcinoma plasma cell myeloma amyotrophic lateral sclerosis lymphoplasmacytic lymphoma osteoarthritis ovarian cancer keloid carcinoma HIV infectious disease Mammary Neoplasms, Experimental sarcomatoid carcinoma pemphigus undifferentiated carcinoma acute myeloid leukemia mammary neoplasms, animal nasopharyngeal carcinoma plasma cell myeloma amyotrophic lateral sclerosis lymphoplasmacytic lymphoma osteoarthritis ovarian cancer invasive ductal breast carcinoma myopathy osteoarthritis susceptibility 1
A	Pharos: O14980	atrial fibrillation prostate cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor Relapse multiple myeloma adrenal cortex adenoma breast cancer lung cancer malignant pancreatic neoplasm oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma plasma cell myeloma Sjogren syndrome adrenal cortex carcinoma atypical teratoid rhabdoid tumor atrial fibrillation prostate cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor Relapse multiple myeloma adrenal cortex adenoma breast cancer lung cancer malignant pancreatic neoplasm oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma plasma cell myeloma Sjogren syndrome adrenal cortex carcinoma atypical teratoid rhabdoid tumor dermatomyositis lymphoplasmacytic lymphoma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm primary mediastinal large B-cell lymphoma astrocytic tumor B-cell chronic lymphocytic leukemia juvenile dermatomyositis malignant ependymoma myopathy pancreatic ductal adenocarcinoma