Cryo-EM structure of photosystem II C2S2M2L2 supercomplex from the green alga Chlorella ohadii
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth 2] | PAD_N | e9hd721 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| M [auth 15] | PC_rep, HEAT_2, RPN2_C | e9hd7151 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| J [auth 12] | PAD_N | e9hd7121 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| E [auth 5] | PAD_N | e9hd751 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| BB [auth n] | PC_rep, HEAT_2, RPN2_C | e9hd7n1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| BA [auth N] | PAD_N | e9hd7N1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| GA [auth S] | Chloroa_b-bind | e9hd7S1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: Chloroa_b-bind | ECOD (v295.2) |
| RA [auth d] | PC_rep, HEAT_2, RPN2_C | e9hd7d1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| R [auth D] | PAD_N | e9hd7D1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| QA [auth c] | MbtH | e9hd7c1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: MbtH | ECOD (v295.2) |
| Q [auth C] | MbtH | e9hd7C1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: MbtH | ECOD (v295.2) |
| PA [auth b] | CLP_protease | e9hd7b1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CLP_protease | ECOD (v295.2) |
| P [auth B] | CLP_protease | e9hd7B1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CLP_protease | ECOD (v295.2) |
| OA [auth a] | MbtH | e9hd7a1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: MbtH | ECOD (v295.2) |
| O [auth A] | MbtH | e9hd7A1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: MbtH | ECOD (v295.2) |
| N [auth 16] | PAD_N | e9hd7161 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| K [auth 13] | PAD_N | e9hd7131 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| F [auth 6] | PC_rep, HEAT_2, RPN2_C | e9hd761 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| C [auth 3] | PAD_N | e9hd731 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| NB [auth z] | PAD_N | e9hd7z1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| NA [auth Z] | PAD_N | e9hd7Z1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| MB [auth y] | PAD_N | e9hd7y1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| MA [auth Y] | PAD_N | e9hd7Y1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| LB [auth x] | PAD_N | e9hd7x1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| LA [auth X] | PC_rep, HEAT_2, RPN2_C | e9hd7X1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| KB [auth w] | PAD_N | e9hd7w1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| KA [auth W] | PC_rep, HEAT_2, RPN2_C | e9hd7W1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| JB [auth v] | PAD_N | e9hd7v1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| JA [auth V] | PC_rep, HEAT_2, RPN2_C | e9hd7V1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| IB [auth u] | PAD_N | e9hd7u1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| IA [auth U] | PC_rep, HEAT_2, RPN2_C | e9hd7U1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| HB [auth t] | PC_rep, HEAT_2, RPN2_C | e9hd7t1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| HA [auth T] | PAD_N | e9hd7T1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| FA [auth R] | V-set,Mst1_SARAH | e9hd7R1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: V-set,Mst1_SARAH | ECOD (v295.2) |
| EB [auth q] | PAD_N | e9hd7q1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| EA [auth Q] | PC_rep, HEAT_2, RPN2_C | e9hd7Q1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| DB [auth p] | PAD_N | e9hd7p1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| DA [auth P] | PAD_N | e9hd7P1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| AB [auth m] | PC_rep, HEAT_2, RPN2_C | e9hd7m1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| AA [auth M] | PAD_N | e9hd7M1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| ZA [auth l] | CLP_protease | e9hd7l1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CLP_protease | ECOD (v295.2) |
| Z [auth L] | CLP_protease | e9hd7L1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CLP_protease | ECOD (v295.2) |
| YA [auth k] | MbtH | e9hd7k1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: MbtH | ECOD (v295.2) |
| Y [auth K] | MbtH | e9hd7K1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: MbtH | ECOD (v295.2) |
| XA [auth j] | PAD_N | e9hd7j1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| X [auth J] | PAD_N | e9hd7J1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| WA [auth i] | CLP_protease | e9hd7i1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CLP_protease | ECOD (v295.2) |
| W [auth I] | CLP_protease | e9hd7I1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CLP_protease | ECOD (v295.2) |
| VA [auth h] | PC_rep, HEAT_2, RPN2_C | e9hd7h1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| V [auth H] | PAD_N | e9hd7H1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| TA [auth f] | PC_rep, HEAT_2, RPN2_C | e9hd7f1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| T [auth F] | PAD_N | e9hd7F1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| SA [auth e] | PC_rep, HEAT_2, RPN2_C | e9hd7e1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PC_rep, HEAT_2, RPN2_C | ECOD (v295.2) |
| S [auth E] | PAD_N | e9hd7E1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| UA [auth g] | PAD_N | e9hd7g1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| U [auth G] | PAD_N | e9hd7G1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| L [auth 14] | PAD_N | e9hd7141 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| I [auth 11] | PAD_N | e9hd7111 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| D [auth 4] | PAD_N | e9hd741 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
| A [auth 1] | PAD_N | e9hd711 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PAD_N | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family | |
| K [auth 13], N [auth 16] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| C [auth 3], F [auth 6] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| MA [auth Y], MB [auth y] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| LA [auth X], LB [auth x] | PF06596 | Photosystem II reaction centre X protein (PsbX) (PsbX) | Photosystem II reaction centre X protein (PsbX) | - | Family |
| FA [auth R], FB [auth r] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| DA [auth P], DB [auth p] | PF01789 | PsbP (PsbP) | PsbP | This entry consists of the 23 kDa subunit of oxygen evolving system of photosystem II or PsbP from various plants (where it is encoded by the nuclear genome) and Cyanobacteria (known as CyanoP). The 23 KDa PsbP protein is required for PSII to be ful ... | Domain |