9H68 | pdb_00009h68

Crystal Structure of the spore gernation lytic transglycosylase SleC from Clostridioides difficile in its zymogenic form (prepro-SleC)

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth D],
C [auth B],
D [auth C]		PF01471Putative peptidoglycan binding domain (PG_binding_1)Putative peptidoglycan binding domainThis domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is ...This domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins [3]. The domain is found to bind peptidoglycan experimentally [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth D],
C [auth B],
D [auth C]		Spore cortex-lytic enzyme pre-pro-form - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B [auth D],
C [auth B],
D [auth C]		IPR002477Peptidoglycan binding-likeDomain
A,
B [auth D],
C [auth B],
D [auth C]		IPR036365PGBD-like superfamilyHomologous Superfamily
A,
B [auth D],
C [auth B],
D [auth C]		IPR036366PGBD superfamilyHomologous Superfamily