9H55 | pdb_00009h55

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
28S ribosomal protein S11, mitochondrial
28S ribosomal protein S10, mitochondrial-
28S ribosomal protein S9, mitochondrial
28S ribosomal protein S7, mitochondrial
28S ribosomal protein S6, mitochondrial
28S ribosomal protein S5, mitochondrial
FA [auth a]Putative ribosome-binding factor A, mitochondrial
EA [auth 5]Dimethyladenosine transferase 1, mitochondrial
DA [auth 9]Nitric oxide-associated protein 1
28S ribosomal protein S24, mitochondrial
CA [auth 4]Pentatricopeptide repeat domain-containing protein 3, mitochondrial
BA [auth 1]28S ribosomal protein S35, mitochondrial
AA [auth 0]Small ribosomal subunit protein mS34
28S ribosomal protein S33, mitochondrial
28S ribosomal protein S31, mitochondrial
28S ribosomal protein S29, mitochondrial
28S ribosomal protein S28, mitochondrial
28S ribosomal protein S27, mitochondrial
28S ribosomal protein S26, mitochondrial
28S ribosomal protein S25, mitochondrial
28S ribosomal protein S2, mitochondrial
28S ribosomal protein S23, mitochondrial
28S ribosomal protein S22, mitochondrial
Small ribosomal subunit protein bS21m
28S ribosomal protein S18c, mitochondrial
28S ribosomal protein S18b, mitochondrial
28S ribosomal protein S17, mitochondrial
28S ribosomal protein S16, mitochondrial
28S ribosomal protein S15, mitochondrial
28S ribosomal protein S14, mitochondrial
28S ribosomal protein S12, mitochondrial
12S mitochondrial rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001971Small ribosomal subunit protein uS11Family
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IPR027486Small ribosomal subunit protein uS10 domainDomain
IPR040055Small ribosomal subunit protein uS10mFamily
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR000754Small ribosomal subunit protein uS9Family
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IPR000235Small ribosomal subunit protein uS7Family
IPR023798Small ribosomal subunit protein uS7 domainDomain
IPR000529Small ribosomal subunit protein bS6Family
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
IPR000851Small ribosomal subunit protein uS5Family
IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FA [auth a]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
FA [auth a]IPR039212Ribosome-binding factor A, mitochondrialFamily
FA [auth a]IPR020053Ribosome-binding factor A, conserved siteConserved Site
FA [auth a]IPR023799Ribosome-binding factor A domain superfamilyHomologous Superfamily
FA [auth a]IPR000238Ribosome-binding factor AFamily
EA [auth 5]IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmFamily
EA [auth 5]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
EA [auth 5]IPR020598Ribosomal RNA adenine methylase transferase, N-terminalDomain
EA [auth 5]IPR023165rRNA adenine dimethylase-like, C-terminalHomologous Superfamily
EA [auth 5]IPR011530Ribosomal RNA adenine dimethylaseFamily
EA [auth 5]IPR020596Ribosomal RNA adenine methylase transferase, conserved siteConserved Site
DA [auth 9]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
DA [auth 9]IPR052807Mitochondrial translation and respiration regulatorFamily
DA [auth 9]IPR006073GTP binding domainDomain
DA [auth 9]IPR048422NOA1/YqeH-like, C-terminal domainDomain
DA [auth 9]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
CA [auth 4]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
CA [auth 4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
CA [auth 4]IPR002885Pentatricopeptide repeatRepeat
CA [auth 4]IPR055063Small ribosomal subunit protein mS39, PPRRepeat
BA [auth 1]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
BA [auth 1]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
AA [auth 0]IPR032053Small ribosomal subunit protein mS34Family
IPR013219Small ribosomal subunit protein mS33Family
IPR026299Mitochondrial 28S ribosomal protein S31Family
IPR019368Small ribosomal subunit protein mS29Family
IPR008092Small ribosomal subunit protein mS29, metazoaFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR019375Small ribosomal subunit protein bS1mFamily
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
IPR002885Pentatricopeptide repeatRepeat
IPR019266Small ribosomal subunit protein mS27Family
IPR034913mS27/PTCD2Family
IPR026140Small ribosomal subunit protein mS26Family
IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
IPR001865Small ribosomal subunit protein uS2Family
IPR059242Small ribosomal subunit protein mS23, conserved domainDomain
IPR019520Small ribosomal subunit protein mS23, metazoaFamily
IPR023611Small ribosomal subunit protein mS23, conserved domain, metazoaDomain
IPR019374Small ribosomal subunit protein mS22Family
IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
IPR001911Small ribosomal subunit protein bS21Family
IPR001648Small ribosomal subunit protein bS18Family
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR040054Small ribosomal subunit protein mS40Family
IPR001648Small ribosomal subunit protein bS18Family
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR000266Small ribosomal subunit protein uS17Family
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
IPR000307Small ribosomal subunit protein bS16Family
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IPR000589Small ribosomal subunit protein uS15Family
IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
IPR052137Universal small ribosomal subunit uS15Family
IPR001209Small ribosomal subunit protein uS14Family
IPR006032Small ribosomal subunit protein uS12Family
IPR005679Ribosomal protein uS12, bacteriaFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
P82912
P82664
P82933
Q9Y2R9
P82932
P82675
FA [auth a]Q8N0V3
EA [auth 5]Q8WVM0
DA [auth 9]Q8NC60
CA [auth 4]Q96EY7
BA [auth 1]P82673
AA [auth 0]P82930
Q9Y291
Q92665
P51398
Q9Y2Q9
Q92552
P82663
Q9Y399
Q9Y3D9
P82650
P82921
Q9Y3D5
Q9Y676
Q9Y2R5
Q9Y3D3
P82914
O60783
O15235

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
5F0
ACE AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

:  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359