9GO6 | pdb_00009go6

Salmonella hook-filament junction complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Z [auth Q]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
Y [auth P]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
X [auth O]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
W [auth N]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
V [auth M]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
U [auth L]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
EA [auth V]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
DA [auth U]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
CA [auth T]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
BA [auth S]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
AA [auth R]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
SA [auth n]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
SA [auth n]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
SA [auth n]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
RA [auth m]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
RA [auth m]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
RA [auth m]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
QA [auth l]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
QA [auth l]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
QA [auth l]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
PA [auth k]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
PA [auth k]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
PA [auth k]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
LA [auth g]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
LA [auth g]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
LA [auth g]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
KA [auth f]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
KA [auth f]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
KA [auth f]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
JA [auth e]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
JA [auth e]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
JA [auth e]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
IA [auth d]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
IA [auth d]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
IA [auth d]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
HA [auth c]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
HA [auth c]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
HA [auth c]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
GA [auth b]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
GA [auth b]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
GA [auth b]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
FA [auth a]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
FA [auth a]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
FA [auth a]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
XA [auth z]Beta-Caspe9go6z1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
WA [auth y]Beta-Caspe9go6y1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
VA [auth x]Beta-Caspe9go6x1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
UA [auth w]Beta-Caspe9go6w1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
I [auth 9]Beta-Caspe9go691 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
H [auth 8]Beta-Caspe9go681 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
G [auth 7]Beta-Caspe9go671 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
F [auth 6]Beta-Caspe9go661 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
E [auth 5]Beta-Caspe9go651 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
D [auth 4]Beta-Caspe9go641 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
C [auth 3]Beta-Caspe9go631 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
B [auth 2]Beta-Caspe9go621 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
A [auth 1]Beta-Caspe9go611 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
T [auth K]Beta-Caspe9go6K1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
S [auth J]Beta-Caspe9go6J1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
R [auth I]Beta-Caspe9go6I1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
Q [auth H]Beta-Caspe9go6H1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
P [auth G]Beta-Caspe9go6G1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
O [auth F]Beta-Caspe9go6F1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
N [auth E]Beta-Caspe9go6E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
M [auth D]Beta-Caspe9go6D1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
L [auth C]Beta-Caspe9go6C1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
K [auth B]Beta-Caspe9go6B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
J [auth A]PsaLe9go6A01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: PsaLECOD (v294.2)
Z [auth Q]Beta-Caspe9go6Q1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
Y [auth P]Beta-Caspe9go6P1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
X [auth O]Beta-Caspe9go6O1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
W [auth N]Beta-Caspe9go6N1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
V [auth M]Beta-Caspe9go6M1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
U [auth L]PsaLe9go6L01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: PsaLECOD (v294.2)
EA [auth V]Beta-Caspe9go6V1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
DA [auth U]Beta-Caspe9go6U1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
CA [auth T]Beta-Caspe9go6T1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
BA [auth S]Beta-Caspe9go6S1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
AA [auth R]Beta-Caspe9go6R1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
TA [auth o]Beta-Caspe9go6o1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
SA [auth n]Beta-Caspe9go6n1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
RA [auth m]Beta-Caspe9go6m1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
QA [auth l]Beta-Caspe9go6l1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
PA [auth k]Beta-Caspe9go6k1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
OA [auth j]Beta-Caspe9go6j1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
NA [auth i]Beta-Caspe9go6i1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
MA [auth h]Beta-Caspe9go6h1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
LA [auth g]Beta-Caspe9go6g1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
KA [auth f]Beta-Caspe9go6f1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
JA [auth e]Beta-Caspe9go6e1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
IA [auth d]Beta-Caspe9go6d1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
HA [auth c]Beta-Caspe9go6c1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
GA [auth b]Beta-Caspe9go6b1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
FA [auth a]Beta-Caspe9go6a1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00700Bacterial flagellin C-terminal helical region (Flagellin_C)Bacterial flagellin C-terminal helical regionFlagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].
Domain
PF08884Flagellin D3 domain (Flagellin_D3)Flagellin D3 domainThis domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stabi ...This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stability [2].
Domain
PF00669Bacterial flagellin N-terminal helical region (Flagellin_N)Bacterial flagellin N-terminal helical region- Family
PF21504Flagellin, barrel domain (FLIC_barrel)Flagellin, barrel domainThis entry represents a barrel domain of flagellins FliC and FljB, which have a boomerang-shape with one arm composed of domain D1 and the other formed by D2 and D3 [1-3]. This entry corresponds to to subdomain D2b described in [4]. Domain
PF08884Flagellin D3 domain (Flagellin_D3)Flagellin D3 domainThis domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stabi ...This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stability [2].
Domain
PF00669Bacterial flagellin N-terminal helical region (Flagellin_N)Bacterial flagellin N-terminal helical region- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Flagellar hook protein FlgE-
Flagellar hook-associated protein 1
Flagellar hook-associated protein
Flagellin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR011491Flagellar hook protein FlgE, D2 domainDomain
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR053967Flagellar hook protein FlgE/F/G-like, D1 domainDomain
IPR037058Flagellar hook protein FlgE superfamilyHomologous Superfamily
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily
IPR049119Flagellar hook-associated protein 1, D2-like domainDomain
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR002371Flagellar hook-associated protein 1Family
IPR053927Flagellar hook-associated protein FlgK, helical domainDomain
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR013384Flagellar hook-associated protein 3Family
IPR001029Flagellin, N-terminal domainDomain
IPR001492FlagellinFamily
IPR049365Flagellin, barrel domainDomain
IPR046358Flagellin, C-terminal domainDomain
IPR014981Flagellin D3Domain
IPR001029Flagellin, N-terminal domainDomain
IPR042187Flagellin, C-terminal domain, subdomain 2Homologous Superfamily
IPR001492FlagellinFamily