9G9Y | pdb_00009g9y

Respiratory supercomplex CI2-CIII2-CIV2 (megacomplex) from alphaproteobacterium


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth C],
F [auth C1]
NADH-quinone oxidoreductase subunit C -
S [auth J],
T [auth J1]
NADH-quinone oxidoreductase subunit J -
W [auth L],
X [auth L1]
NADH dehydrogenase subunit L
QA [auth g],
UA [auth k]
Cytochrome c oxidase subunit 1
SA [auth i],
WA [auth m]
cytochrome-c oxidase
YA [auth o],
ZA [auth p]
Cytochrome c, class I -
Q [auth I],
R [auth I1]
NADH-quinone oxidoreductase subunit I
O [auth H],
P [auth H1]
NADH-quinone oxidoreductase subunit H
M [auth G],
N [auth G1]
NADH-quinone oxidoreductase
K [auth F],
L [auth F1]
NADH-quinone oxidoreductase subunit F - -
I [auth E],
J [auth E1]
NADH dehydrogenase subunit E -
G [auth D],
H [auth D1]
NADH-quinone oxidoreductase subunit D -
AB [auth q],
BB [auth q1]
NADH:ubiquinone oxidoreductase 17.2 kD subunit-
TA [auth j],
XA [auth n]
Aa3 type cytochrome c oxidase subunit IV- - -
RA [auth h],
VA [auth l]
Cytochrome c oxidase subunit 2
MA [auth c],
PA [auth f]
Ubiquinol-cytochrome c reductase iron-sulfur subunit -
LA [auth b],
OA [auth e]
Cytochrome c1 -
C [auth B],
D [auth B1]
NADH-quinone oxidoreductase subunit B
KA [auth a],
NA [auth d]
Cytochrome b
IA [auth Z],
JA [auth Z1]
Protein-L-isoaspartate O-methyltransferase
GA [auth R],
HA [auth R1]
Zinc finger CHCC-type domain-containing protein- - -
EA [auth Q],
FA [auth Q1]
ETC complex I subunit conserved region-
CA [auth P],
DA [auth P1]
NAD-dependent epimerase/dehydratase - -
AA [auth N],
BA [auth N1]
NADH-quinone oxidoreductase subunit N
Y [auth M],
Z [auth M1]
NADH dehydrogenase subunit M
U [auth K],
V [auth K1]
NADH-quinone oxidoreductase subunit K
A,
B [auth A1]
NADH-quinone oxidoreductase subunit A -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth C],
F [auth C1]
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
E [auth C],
F [auth C1]
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
E [auth C],
F [auth C1]
IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
E [auth C],
F [auth C1]
IPR010218NADH dehydrogenase, subunit CFamily
S [auth J],
T [auth J1]
IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
S [auth J],
T [auth J1]
IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
W [auth L],
X [auth L1]
IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
W [auth L],
X [auth L1]
IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
W [auth L],
X [auth L1]
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
W [auth L],
X [auth L1]
IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
QA [auth g],
UA [auth k]
IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
QA [auth g],
UA [auth k]
IPR000883Cytochrome c oxidase subunit IFamily
QA [auth g],
UA [auth k]
IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
QA [auth g],
UA [auth k]
IPR023616Cytochrome c oxidase-like, subunit I domainDomain
QA [auth g],
UA [auth k]
IPR033944Cytochrome c oxidase subunit I domainDomain
QA [auth g],
UA [auth k]
IPR014241Cytochrome c oxidase, subunit I bacterial typeFamily
SA [auth i],
WA [auth m]
IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
SA [auth i],
WA [auth m]
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
SA [auth i],
WA [auth m]
IPR000298Cytochrome c oxidase subunit III-likeDomain
SA [auth i],
WA [auth m]
IPR033945Cytochrome c oxidase subunit III domainDomain
SA [auth i],
WA [auth m]
IPR024791Cytochrome c oxidase subunit IIIFamily
YA [auth o],
ZA [auth p]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
YA [auth o],
ZA [auth p]
IPR009056Cytochrome c-like domainDomain
YA [auth o],
ZA [auth p]
IPR002327Cytochrome c, class IA/ IBFamily
Q [auth I],
R [auth I1]
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
Q [auth I],
R [auth I1]
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
Q [auth I],
R [auth I1]
IPR010226NADH-quinone oxidoreductase, chain IFamily
O [auth H],
P [auth H1]
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
O [auth H],
P [auth H1]
IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
M [auth G],
N [auth G1]
IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
M [auth G],
N [auth G1]
IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
M [auth G],
N [auth G1]
IPR006656Molybdopterin oxidoreductaseDomain
M [auth G],
N [auth G1]
IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
M [auth G],
N [auth G1]
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
M [auth G],
N [auth G1]
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
M [auth G],
N [auth G1]
IPR054351NADH-ubiquinone oxidoreductase, ferredoxin-like domainDomain
M [auth G],
N [auth G1]
IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
M [auth G],
N [auth G1]
IPR050123Prok_molybdopt-oxidoreductaseUnknown
M [auth G],
N [auth G1]
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
K [auth F],
L [auth F1]
IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
K [auth F],
L [auth F1]
IPR054765SLBB domainDomain
K [auth F],
L [auth F1]
IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
K [auth F],
L [auth F1]
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
K [auth F],
L [auth F1]
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
K [auth F],
L [auth F1]
IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
K [auth F],
L [auth F1]
IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
K [auth F],
L [auth F1]
IPR050837Complex I 51 kDa subunitFamily
I [auth E],
J [auth E1]
IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
I [auth E],
J [auth E1]
IPR042128NuoE domainDomain
I [auth E],
J [auth E1]
IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
I [auth E],
J [auth E1]
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
G [auth D],
H [auth D1]
IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
G [auth D],
H [auth D1]
IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
G [auth D],
H [auth D1]
IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
G [auth D],
H [auth D1]
IPR001135NADH-quinone oxidoreductase, subunit DDomain
AB [auth q],
BB [auth q1]
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
TA [auth j],
XA [auth n]
IPR012422Cytochrome c oxidase, subunit IV, bacterial aa3 typeDomain
TA [auth j],
XA [auth n]
IPR036596Bacterial aa3 type cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
RA [auth h],
VA [auth l]
IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
RA [auth h],
VA [auth l]
IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
RA [auth h],
VA [auth l]
IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
RA [auth h],
VA [auth l]
IPR008972CupredoxinHomologous Superfamily
RA [auth h],
VA [auth l]
IPR001505Copper centre Cu(A)Binding Site
RA [auth h],
VA [auth l]
IPR045187Cytochrome c/quinol oxidase subunit IIFamily
RA [auth h],
VA [auth l]
IPR014222Cytochrome c oxidase, subunit IIDomain
MA [auth c],
PA [auth f]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
MA [auth c],
PA [auth f]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
MA [auth c],
PA [auth f]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
MA [auth c],
PA [auth f]
IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
MA [auth c],
PA [auth f]
IPR014349Rieske iron-sulphur proteinFamily
MA [auth c],
PA [auth f]
IPR019470Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signalDomain
MA [auth c],
PA [auth f]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
MA [auth c],
PA [auth f]
IPR019546Twin-arginine translocation pathway, signal sequence, bacterial/archaealConserved Site
LA [auth b],
OA [auth e]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
LA [auth b],
OA [auth e]
IPR002326Cytochrome c1Family
LA [auth b],
OA [auth e]
IPR009056Cytochrome c-like domainDomain
C [auth B],
D [auth B1]
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
C [auth B],
D [auth B1]
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
KA [auth a],
NA [auth d]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
KA [auth a],
NA [auth d]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
KA [auth a],
NA [auth d]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
KA [auth a],
NA [auth d]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
KA [auth a],
NA [auth d]
IPR005798Cytochrome b/b6, C-terminalDomain
KA [auth a],
NA [auth d]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
KA [auth a],
NA [auth d]
IPR030689Cytochrome bFamily
KA [auth a],
NA [auth d]
IPR005797Cytochrome b/b6, N-terminal domainDomain
IA [auth Z],
JA [auth Z1]
IPR000682Protein-L-isoaspartate(D-aspartate) O-methyltransferaseFamily
IA [auth Z],
JA [auth Z1]
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
GA [auth R],
HA [auth R1]
IPR019401Zinc finger, CHCC-typeDomain
EA [auth Q],
FA [auth Q1]
IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
EA [auth Q],
FA [auth Q1]
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
CA [auth P],
DA [auth P1]
IPR051207Mitochondrial Complex I NDUFA9 SubunitFamily
CA [auth P],
DA [auth P1]
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
CA [auth P],
DA [auth P1]
IPR001509NAD-dependent epimerase/dehydrataseDomain
AA [auth N],
BA [auth N1]
IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
AA [auth N],
BA [auth N1]
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
Y [auth M],
Z [auth M1]
IPR003918NADH:ubiquinone oxidoreductaseFamily
Y [auth M],
Z [auth M1]
IPR010227NADH-quinone oxidoreductase, chain M/4Family
Y [auth M],
Z [auth M1]
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
U [auth K],
V [auth K1]
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
U [auth K],
V [auth K1]
IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
A,
B [auth A1]
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidFamily
A,
B [auth A1]
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
A,
B [auth A1]
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
S [auth J],
T [auth J1]
FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
W [auth L],
X [auth L1]
FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
G [auth D],
H [auth D1]
2MR Parent Component: ARG

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0067

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , symmetric dimethyl-L-arginine MOD:00076
AB [auth q],
BB [auth q1]
FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0067 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
Y [auth M],
Z [auth M1]
FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0067 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
A,
B [auth A1]
FME Parent Component: MET

RESIDAA0021 , AA0566 , AA0021 , AA0566 , AA0067 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , symmetric dimethyl-L-arginine MOD:00076 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891