Structure of OmpA-long in complex with nanobody Nb39
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01389 | OmpA-like transmembrane domain (OmpA_membrane) | OmpA-like transmembrane domain | The structure of OmpA transmembrane domain shows that it consists of an eight stranded beta barrel [1]. This family includes some other distantly related outer membrane proteins with low scores. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Nanobody 39 | - | - | - | |
| Outer membrane protein A |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011250 | Outer membrane protein/outer membrane enzyme PagP, beta-barrel | Homologous Superfamily | |
| IPR006664 | Outer membrane protein, bacterial | Domain | |
| IPR006665 | OmpA-like domain | Domain | |
| IPR000498 | Outer membrane protein OmpA-like, transmembrane domain | Domain | |
| IPR002368 | Outer membrane protein, OmpA | Family | |
| IPR006690 | Outer membrane protein, OmpA-like, conserved site | Conserved Site | |
| IPR050330 | Bacterial Outer Membrane Structural/Functional | Family | |
| IPR036737 | OmpA-like domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |














