Structure of OmpA-long in complex with nanobody Nb39
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e9fzdA01 | A: a/b three-layered sandwiches | X: ATP-grasp_6 | H: ATP-grasp_6 | T: ATP-grasp_6 | F: | ECOD (v294.1) | |
| B | e9fzdB01 | A: a/b three-layered sandwiches | X: ATP-grasp_6 | H: ATP-grasp_6 | T: ATP-grasp_6 | F: | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Outer membrane protein A |
| |||
| Nanobody 39 | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR006664 | Outer membrane protein, bacterial | Domain | |
| IPR000498 | Outer membrane protein OmpA-like, transmembrane domain | Domain | |
| IPR006690 | Outer membrane protein, OmpA-like, conserved site | Conserved Site | |
| IPR050330 | Bacterial Outer Membrane Structural/Functional | Family | |
| IPR036737 | OmpA-like domain superfamily | Homologous Superfamily | |
| IPR011250 | Outer membrane protein/outer membrane enzyme PagP, beta-barrel | Homologous Superfamily | |
| IPR006665 | OmpA-like domain | Domain | |
| IPR002368 | Outer membrane protein, OmpA | Family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |














