9FIA | pdb_00009fia

SSU(body) structure derived from the SSU sample of the mitoribosome from T. gondii.

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth B6]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
SA [auth HJ]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
C [auth B2]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
X [auth BO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
V [auth BL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
V [auth BL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
R [auth BH]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
R [auth BH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
M [auth BC]PF16113Enoyl-CoA hydratase/isomerase (ECH_2)Enoyl-CoA hydratase/isomeraseThis family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's ...This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's C-terminus.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth B8],
PA [auth Bj]		unidentified peptide---
H [auth B7]unidentified peptide---
G [auth B6]Putative mitochondrial ribosomal protein s6-2
QB [auth bY]ulr21---
PB [auth bV]ulr20---
OB [auth bU]ulr19---
NB [auth bT]SSUF---
MB [auth bS]url18---
LB [auth bR]RNA30---
KB [auth bQ]ulr17---
F [auth B5]Ribosomal protein S11, putative
JB [auth bP]ulr16---
IB [auth bO]SSUA---
HB [auth bN]SSUB---
GB [auth bL]RNA17---
FB [auth bK]RNA5---
EB [auth bJ]RNA33---
DB [auth bI]ulr15---
CB [auth bH]ulr14---
BB [auth bG]ulr13---
AB [auth bE]RNA8---
E [auth B4]CHCH domain-containing protein- - -
ZA [auth bD]RNA15---
YA [auth bA]RNA19---
XA [auth b4]RNA13---
WA [auth b3]ulr12---
VA [auth b2]SSUE---
UA [auth b1]ulr11---
TA [auth HS]Acylphosphatase-like domain-containing protein- - -
SA [auth HJ]30S ribosomal protein S5, putative
RA [auth Bl]30S ribosomal protein S12, putative
QA [auth Bk]Mitochondrial ribosomal protein, mS26- - -
D [auth B3]Mitochondrial ribosomal protein, mS23- - -
OA [auth Bi]Mitochondrial ribosomal protein, mS153- - -
NA [auth Bh]Putative 30S ribosomal protein S16
MA [auth Bg]Ribosomal protein, uS2m- - -
LA [auth Be]unidentified peptide---
KA [auth Bd]unidentified peptide---
JA [auth Bc]Enoyl-CoA hydratase/isomerase family protein
IA [auth Bb]unidentified peptide---
HA [auth Ba]unidentified peptide---
GA [auth BY]unidentified peptide---
EA [auth BW]Mitochondrial ribosomal protein, mS144- - -
C [auth B2]Ribosomal protein S18, putative
DA [auth BV]Putative homeodomain containing protein- - -
CA [auth BU]unidentified peptide---
BA [auth BT]Mitochondrial ribosomal protein, mS156- - -
AA [auth BS]Ribosomal protein, bS21m- - -
Z [auth BQ]Macro domain-containing protein- - -
Y [auth BP]unidentified peptide---
X [auth BO]Putative 30S ribosomal protein S15
V [auth BL]Putative ribosomal protein S17
U [auth BK]Mitochondrial ribosomal protein, mS26- - -
T [auth BJ]unidentified peptide---
B [auth B1]unidentified peptide---
FA [auth BX],
S [auth BI],
W [auth BN]		unidentified peptide---
R [auth BH]Putative ribosomal protein S8
Q [auth BG]Ribosomal protein, uS2m- - -
P [auth BF]Mitochondrial ribosomal protein, mS147- - -
O [auth BE]Mitochondrial ribosomal protein, mS140- - -
N [auth BD]Pentatricopeptide repeat domain-containing protein- - -
M [auth BC]Mitochondrial ribosomal protein, mS47- - -
L [auth BB]RAP domain-containing protein- - -
K [auth BA]Mitochondrial ribosomal protein, mS137- - -
J [auth B9]DnaJ domain-containing protein- - -
A [auth B0]Mitochondrial ribosomal protein, mS145- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth B6]IPR000529Small ribosomal subunit protein bS6Family
G [auth B6]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
G [auth B6]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
G [auth B6]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
F [auth B5]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
TA [auth HS]IPR001792Acylphosphatase-like domainDomain
SA [auth HJ]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
SA [auth HJ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
SA [auth HJ]IPR014720Double-stranded RNA-binding domainDomain
SA [auth HJ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth Bl]IPR006032Small ribosomal subunit protein uS12Family
RA [auth Bl]IPR005679Ribosomal protein uS12, bacteriaFamily
RA [auth Bl]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth Bh]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
NA [auth Bh]IPR000307Small ribosomal subunit protein bS16Family
JA [auth Bc]IPR029045ClpP/crotonase-like domain superfamilyHomologous Superfamily
JA [auth Bc]IPR045004Enoyl-CoA hydratase/isomerase domainDomain
JA [auth Bc]IPR052377Mitochondrial enoyl-CoA hydratase domain-containing proteinFamily
C [auth B2]IPR001648Small ribosomal subunit protein bS18Family
C [auth B2]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
DA [auth BV]IPR009057Homedomain-like superfamilyHomologous Superfamily
Z [auth BQ]IPR043472Macro domain-likeHomologous Superfamily
Z [auth BQ]IPR002589Macro domainDomain
X [auth BO]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
X [auth BO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
X [auth BO]IPR000589Small ribosomal subunit protein uS15Family
V [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
V [auth BL]IPR000266Small ribosomal subunit protein uS17Family
R [auth BH]IPR000630Small ribosomal subunit protein uS8Family
R [auth BH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily