9FBV | pdb_00009fbv

70S Escherichia coli ribosome with P-site initiatior tRNA.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth f]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
H [auth e]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
G [auth d]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
F [auth c]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
F [auth c]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
ZA [auth S]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
YA [auth N]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
XA [auth M]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
WA [auth J]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
VA [auth I]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
UA [auth G]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
RA [auth U]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
OA [auth Q]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
NA [auth P]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
D [auth 3]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
MA [auth O]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
LA [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
KA [auth K]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
JA [auth H]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
IA [auth F]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
GA [auth D]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
FA [auth B]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
EA [auth j]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
C [auth 2]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
CA [auth 4]SCOP2B SuperfamilyL28p-like 8032740 3001966 SCOP2B (2022-06-29)
BA [auth z]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
AA [auth y]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
Z [auth x]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
Y [auth w]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
X [auth v]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
W [auth u]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
V [auth t]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
U [auth s]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
T [auth r]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
S [auth q]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
R [auth p]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
Q [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
P [auth n]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
O [auth m]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
N [auth l]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
M [auth k]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
L [auth i]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
J [auth g]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
J [auth g]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
A [auth 0]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
BB [auth Z]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
ZA [auth S]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
ZA [auth S]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
YA [auth N]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth M]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
XA [auth M]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
WA [auth J]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
WA [auth J]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
VA [auth I]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
VA [auth I]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
UA [auth G]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
TA [auth C]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
TA [auth C]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
TA [auth C]PF07650KH domain (KH_2)KH domainDomain
TA [auth C]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
RA [auth U]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
RA [auth U]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
QA [auth T]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
QA [auth T]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
QA [auth T]PF00467KOW motif (KOW)KOW motif- Family
PA [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
PA [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
OA [auth Q]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
OA [auth Q]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
NA [auth P]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
NA [auth P]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
D [auth 3]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
MA [auth O]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
MA [auth O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
LA [auth L]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
LA [auth L]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
KA [auth K]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
KA [auth K]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
JA [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
JA [auth H]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
IA [auth F]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
IA [auth F]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
IA [auth F]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
HA [auth E]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
HA [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
HA [auth E]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
GA [auth D]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
GA [auth D]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
GA [auth D]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
FA [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
C [auth 2]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
CA [auth 4]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
B [auth 1]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
A [auth 0]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth f]Large ribosomal subunit protein uL5
H [auth e]Large ribosomal subunit protein uL4
G [auth d]Large ribosomal subunit protein uL3
F [auth c]Large ribosomal subunit protein uL2
BB [auth Z]fMet-tRNA---
AB [auth A]16S ribosomal RNA---
ZA [auth S]Small ribosomal subunit protein uS19
YA [auth N]Small ribosomal subunit protein uS14
XA [auth M]Small ribosomal subunit protein uS13
E [auth b]5S ribosomal RNA---
WA [auth J]Small ribosomal subunit protein uS10
VA [auth I]Small ribosomal subunit protein uS9
UA [auth G]30S ribosomal protein S7
TA [auth C]Small ribosomal subunit protein uS3
SA [auth X]messenger RNA---
RA [auth U]Small ribosomal subunit protein bS21
QA [auth T]30S ribosomal protein S20
PA [auth R]Small ribosomal subunit protein bS18
OA [auth Q]Small ribosomal subunit protein uS17
NA [auth P]30S ribosomal protein S16
D [auth 3]Large ribosomal subunit protein bL36A
MA [auth O]Small ribosomal subunit protein uS15
LA [auth L]Small ribosomal subunit protein uS12
KA [auth K]Small ribosomal subunit protein uS11
JA [auth H]Small ribosomal subunit protein uS8
IA [auth F]30S ribosomal protein S6, fully modified isoform
HA [auth E]Small ribosomal subunit protein uS5
GA [auth D]Small ribosomal subunit protein uS4
FA [auth B]30S ribosomal protein S2
EA [auth j]Large ribosomal subunit protein uL14
DA [auth a]23S ribosomal RNA---
C [auth 2]Large ribosomal subunit protein bL35
CA [auth 4]Large ribosomal subunit protein bL31A
BA [auth z]Large ribosomal subunit protein bL32
AA [auth y]Large ribosomal subunit protein uL30
Z [auth x]Large ribosomal subunit protein uL29
Y [auth w]Large ribosomal subunit protein bL28
X [auth v]Large ribosomal subunit protein bL27
W [auth u]50S ribosomal protein L25
V [auth t]Large ribosomal subunit protein uL24
U [auth s]Large ribosomal subunit protein uL23
T [auth r]Large ribosomal subunit protein uL22
B [auth 1]Large ribosomal subunit protein bL34
S [auth q]Large ribosomal subunit protein bL21
R [auth p]Large ribosomal subunit protein bL20
Q [auth o]Large ribosomal subunit protein bL19
P [auth n]Large ribosomal subunit protein uL18
O [auth m]Large ribosomal subunit protein bL17
N [auth l]Large ribosomal subunit protein uL16
M [auth k]50S ribosomal protein L15
L [auth i]Large ribosomal subunit protein uL13
K [auth h]Large ribosomal subunit protein bL9
J [auth g]Large ribosomal subunit protein uL6
A [auth 0]Large ribosomal subunit protein bL33

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth f]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
I [auth f]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
I [auth f]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
I [auth f]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
I [auth f]IPR002132Large ribosomal subunit protein uL5Family
I [auth f]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
H [auth e]IPR013005Large ribosomal subunit protein uL4-likeFamily
H [auth e]IPR002136Large ribosomal subunit protein uL4Family
H [auth e]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth d]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
G [auth d]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
G [auth d]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth d]IPR000597Large ribosomal subunit protein uL3Family
F [auth c]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
F [auth c]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
F [auth c]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth c]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
F [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth c]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
F [auth c]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
F [auth c]IPR002171Large ribosomal subunit protein uL2Family
ZA [auth S]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
ZA [auth S]IPR002222Small ribosomal subunit protein uS19Family
ZA [auth S]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
ZA [auth S]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
YA [auth N]IPR001209Small ribosomal subunit protein uS14Family
YA [auth N]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
YA [auth N]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
XA [auth M]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
XA [auth M]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
XA [auth M]IPR001892Small ribosomal subunit protein uS13Family
XA [auth M]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
XA [auth M]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
WA [auth J]IPR027486Small ribosomal subunit protein uS10 domainDomain
WA [auth J]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
WA [auth J]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
WA [auth J]IPR001848Small ribosomal subunit protein uS10Family
VA [auth I]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
VA [auth I]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
VA [auth I]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
VA [auth I]IPR000754Small ribosomal subunit protein uS9Family
VA [auth I]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
UA [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
UA [auth G]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
UA [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
UA [auth G]IPR000235Small ribosomal subunit protein uS7Family
UA [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
TA [auth C]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
TA [auth C]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
TA [auth C]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
TA [auth C]IPR004087K Homology domainDomain
TA [auth C]IPR004044K Homology domain, type 2Domain
TA [auth C]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
TA [auth C]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
TA [auth C]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
RA [auth U]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
RA [auth U]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
RA [auth U]IPR001911Small ribosomal subunit protein bS21Family
QA [auth T]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
QA [auth T]IPR002583Small ribosomal subunit protein bS20Family
PA [auth R]IPR001648Small ribosomal subunit protein bS18Family
PA [auth R]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
PA [auth R]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
OA [auth Q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
OA [auth Q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
OA [auth Q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OA [auth Q]IPR000266Small ribosomal subunit protein uS17Family
NA [auth P]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
NA [auth P]IPR000307Small ribosomal subunit protein bS16Family
NA [auth P]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
D [auth 3]IPR000473Large ribosomal subunit protein bL36Family
D [auth 3]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
MA [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
MA [auth O]IPR000589Small ribosomal subunit protein uS15Family
MA [auth O]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
LA [auth L]IPR005679Ribosomal protein uS12, bacteriaFamily
LA [auth L]IPR006032Small ribosomal subunit protein uS12Family
LA [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KA [auth K]IPR001971Small ribosomal subunit protein uS11Family
KA [auth K]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KA [auth K]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
KA [auth K]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
JA [auth H]IPR000630Small ribosomal subunit protein uS8Family
JA [auth H]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
JA [auth H]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IA [auth F]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
IA [auth F]IPR000529Small ribosomal subunit protein bS6Family
IA [auth F]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
IA [auth F]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
IA [auth F]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
HA [auth E]IPR000851Small ribosomal subunit protein uS5Family
HA [auth E]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
HA [auth E]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
HA [auth E]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
HA [auth E]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HA [auth E]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
HA [auth E]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GA [auth D]IPR002942RNA-binding S4 domainDomain
GA [auth D]IPR022801Small ribosomal subunit protein uS4Family
GA [auth D]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
GA [auth D]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
GA [auth D]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
GA [auth D]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
FA [auth B]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
FA [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
FA [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
FA [auth B]IPR001865Small ribosomal subunit protein uS2Family
EA [auth j]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
EA [auth j]IPR000218Large ribosomal subunit protein uL14Family
EA [auth j]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
EA [auth j]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
C [auth 2]IPR021137Large ribosomal subunit protein bL35-likeFamily
C [auth 2]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
C [auth 2]IPR001706Large ribosomal subunit protein bL35Family
C [auth 2]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
CA [auth 4]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
CA [auth 4]IPR027491Large ribosomal subunit protein bL31 type AFamily
CA [auth 4]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA [auth 4]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
BA [auth z]IPR002677Large ribosomal subunit protein bL32Family
BA [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth z]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
AA [auth y]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AA [auth y]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
AA [auth y]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AA [auth y]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
Z [auth x]IPR050063Universal ribosomal protein uL29Family
Z [auth x]IPR001854Large ribosomal subunit protein uL29Family
Z [auth x]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Z [auth x]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth w]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
Y [auth w]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
Y [auth w]IPR026569Large ribosomal subunit protein bL28Family
Y [auth w]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
X [auth v]IPR001684Large ribosomal subunit protein bL27Family
X [auth v]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
W [auth u]IPR020055Ribosomal protein bL25, short-formFamily
W [auth u]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
W [auth u]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
W [auth u]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
W [auth u]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
V [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
V [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth t]IPR003256Large ribosomal subunit protein uL24Family
V [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
V [auth t]IPR005824KOWDomain
V [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
U [auth s]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
U [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth r]IPR001063Large ribosomal subunit protein uL22Family
T [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
T [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
T [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
B [auth 1]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
B [auth 1]IPR000271Large ribosomal subunit protein bL34Family
S [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
S [auth q]IPR001787Large ribosomal subunit protein bL21Family
S [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
S [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
R [auth p]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
R [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
R [auth p]IPR005813Large ribosomal subunit protein bL20Family
Q [auth o]IPR001857Large ribosomal subunit protein bL19Family
Q [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
Q [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
Q [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth n]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
P [auth n]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
O [auth m]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
O [auth m]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
O [auth m]IPR000456Large ribosomal subunit protein bL17Family
N [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
N [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
N [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
N [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
N [auth l]IPR047873Large ribosomal subunit protein uL16Family
M [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
M [auth k]IPR030878Large ribosomal subunit protein uL15Family
M [auth k]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
M [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
L [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
L [auth i]IPR005822Large ribosomal subunit protein uL13Family
L [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
L [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K [auth h]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
K [auth h]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
K [auth h]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
K [auth h]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
K [auth h]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
K [auth h]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
K [auth h]IPR000244Large ribosomal subunit protein bL9Family
J [auth g]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
J [auth g]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
J [auth g]IPR000702Large ribosomal subunit protein uL6-likeFamily
J [auth g]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
J [auth g]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
A [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
A [auth 0]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
A [auth 0]IPR001705Large ribosomal subunit protein bL33Family
A [auth 0]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
G [auth d]MEQ Parent Component: GLN

RESIDAA0071

PSI-MOD :  N5-methyl-L-glutamine MOD:00080
AB [auth A]2MG Parent Component: G

RESIDAA0071

AB [auth A]4OC Parent Component: C

RESIDAA0071

AB [auth A]5MC Parent Component: C

RESIDAA0071

AB [auth A]G7M Parent Component: G

RESIDAA0071

AB [auth A]PSU Parent Component: U

RESIDAA0071

AB [auth A]UR3 Parent Component: U

RESIDAA0071

LA [auth L]D2T Parent Component: ASP

RESIDAA0071

KA [auth K]IAS RESIDAA0071

DA [auth a]1MG Parent Component: G

RESIDAA0071

DA [auth a]2MA Parent Component: A

RESIDAA0071

DA [auth a]2MG Parent Component: G

RESIDAA0071

DA [auth a]3TD Parent Component: U

RESIDAA0071

DA [auth a]5MC Parent Component: C

RESIDAA0071

DA [auth a]5MU Parent Component: U

RESIDAA0071

DA [auth a]6MZ Parent Component: A

RESIDAA0071

DA [auth a]G7M Parent Component: G

RESIDAA0071

DA [auth a]H2U Parent Component: U

RESIDAA0071

DA [auth a]OMC Parent Component: C

RESIDAA0071

DA [auth a]OMG Parent Component: G

RESIDAA0071

DA [auth a]OMU Parent Component: U

RESIDAA0071

DA [auth a]PSU Parent Component: U

RESIDAA0071

N [auth l]4D4 Parent Component: ARG

RESIDAA0071

N [auth l]MS6 Parent Component: MET