9FAM | pdb_00009fam

CryoEM structure of human full-length alpha1beta3gamma2 GABA(A)R in complex with GARLH4, the TMD of Neuroligin2, GABA and Megabody38 in a desensitised state (StateD3)

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth L]PF10242Lipoma HMGIC fusion partner-like protein (L_HMGIC_fpl)Lipoma HMGIC fusion partner-like protein- Family
E [auth C]PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
E [auth C]PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
B,
D [auth E]		PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
B,
D [auth E]		PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
A,
C [auth D]		PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
A,
C [auth D]		PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
H [auth G]Megabody38---
G [auth L]LHFPL tetraspan subfamily member 4 protein
F [auth H]Neuroligin-2
E [auth C]Isoform 2 of Gamma-aminobutyric acid receptor subunit gamma-2
B,
D [auth E]		Gamma-aminobutyric acid receptor subunit beta-3
A,
C [auth D]		Gamma-aminobutyric acid receptor subunit alpha-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth L]IPR019372Lipoma HMGIC fusion partner-like proteinFamily
F [auth H]IPR051093Neuroligin and Bile salt-activated lipaseFamily
F [auth H]IPR002018Carboxylesterase, type BDomain
F [auth H]IPR019819Carboxylesterase type B, conserved siteConserved Site
F [auth H]IPR000460NeuroliginFamily
F [auth H]IPR029058Alpha/Beta hydrolase foldHomologous Superfamily
E [auth C]IPR005437Gamma-aminobutyric acid receptor subunit gamma-1/4Family
E [auth C]IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
E [auth C]IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
E [auth C]IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
E [auth C]IPR005439Gamma-aminobutyric-acid A receptor, gamma 2 subunitFamily
E [auth C]IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
E [auth C]IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
E [auth C]IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
E [auth C]IPR038050Neuronal acetylcholine receptorHomologous Superfamily
E [auth C]IPR006201Neurotransmitter-gated ion-channelFamily
B,
D [auth E]		IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
B,
D [auth E]		IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
B,
D [auth E]		IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
B,
D [auth E]		IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
B,
D [auth E]		IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
B,
D [auth E]		IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
B,
D [auth E]		IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
B,
D [auth E]		IPR038050Neuronal acetylcholine receptorHomologous Superfamily
B,
D [auth E]		IPR006201Neurotransmitter-gated ion-channelFamily
A,
C [auth D]		IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
A,
C [auth D]		IPR005431Gamma-aminobutyric-acid A receptor, alpha 1 subunitFamily
A,
C [auth D]		IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
A,
C [auth D]		IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
A,
C [auth D]		IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
A,
C [auth D]		IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
A,
C [auth D]		IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
A,
C [auth D]		IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
A,
C [auth D]		IPR038050Neuronal acetylcholine receptorHomologous Superfamily
A,
C [auth D]		IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
A,
C [auth D]		IPR047079Gamma-aminobutyric acid receptor subunit alpha-1, extracellular domainDomain
A,
C [auth D]		IPR006201Neurotransmitter-gated ion-channelFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
G [auth L]Pharos:  Q7Z7J7
F [auth H]Pharos:  Q8NFZ4
E [auth C]Pharos:  P18507
B,
D [auth E]		Pharos:  P28472
A,
C [auth D]		Pharos:  P14867