CryoEM structure of human full-length alpha1beta3gamma2 GABA(A)R in complex with GARLH4, the TMD of Neuroligin2, GABA and Megabody38 in a desensitised state (StateD3)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| H [auth G] | WD40 | e9famG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| G [auth L] | PF10242 | Lipoma HMGIC fusion partner-like protein (L_HMGIC_fpl) | Lipoma HMGIC fusion partner-like protein | - | Family |
| E [auth C] | PF02932 | Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb) | Neurotransmitter-gated ion-channel transmembrane region | This family includes the four transmembrane helices that form the ion channel. | Domain |
| E [auth C] | PF02931 | Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD) | Neurotransmitter-gated ion-channel ligand binding domain | This family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. | Domain |
| B, D [auth E] | PF02932 | Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb) | Neurotransmitter-gated ion-channel transmembrane region | This family includes the four transmembrane helices that form the ion channel. | Domain |
| B, D [auth E] | PF02931 | Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD) | Neurotransmitter-gated ion-channel ligand binding domain | This family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. | Domain |
| A, C [auth D] | PF02932 | Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb) | Neurotransmitter-gated ion-channel transmembrane region | This family includes the four transmembrane helices that form the ion channel. | Domain |
| A, C [auth D] | PF02931 | Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD) | Neurotransmitter-gated ion-channel ligand binding domain | This family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. | Domain |
