9EVK | pdb_00009evk

Crystal Structure of human Collagen Hydroxylysine Galactosyltransferase GLT25D1/COLGALT1

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01755	Glycosyltransferase family 25 (LPS biosynthesis protein) (Glyco_transf_25)	Glycosyltransferase family 25 (LPS biosynthesis protein)	-	Family
A, B	PF13704	Glycosyltransferase family 25, N-terminal (Glyco_tranf_2_4)	Glycosyltransferase family 25, N-terminal	This entry represents the N-terminal domain of enzymes that are members of glycosyltransferase family 25. Glycosyltransferase family 25 (GT25) comprises enzymes with primary function in bacterial lipopolysaccharide biosynthesis. These enzymes catalys ...	This entry represents the N-terminal domain of enzymes that are members of glycosyltransferase family 25. Glycosyltransferase family 25 (GT25) comprises enzymes with primary function in bacterial lipopolysaccharide biosynthesis. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [1]. Some members such as UDP-Glc:hydroxylysine O-glucosyltransferase and occidiofungin beta-xylosyltransferase participate in other glycan modifications.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Procollagen galactosyltransferase 1	UDP-glycosyltransferase activity catalytic activity, acting on a protein glycosyltransferase activity transferase activity galactosyltransferase activity hexosyltransferase activity procollagen galactosyltransferase activity catalytic activity UDP-galactosyltransferase activity	carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process primary metabolic process glycoprotein metabolic process macromolecule biosynthetic process biosynthetic process protein O-linked glycosylation metabolic process cellular process protein metabolic process macromolecule metabolic process regulation of biological process regulation of cellular component organization carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process primary metabolic process glycoprotein metabolic process macromolecule biosynthetic process biosynthetic process protein O-linked glycosylation metabolic process cellular process protein metabolic process macromolecule metabolic process regulation of biological process regulation of cellular component organization regulation of cellular process positive regulation of cellular component organization positive regulation of collagen fibril organization biological regulation positive regulation of biological process positive regulation of extracellular matrix organization collagen fibril organization extracellular matrix organization cellular component organization cellular component organization or biogenesis regulation of extracellular matrix organization regulation of collagen fibril organization positive regulation of cellular process extracellular structure organization external encapsulating structure organization	cellular anatomical structure membrane membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle organelle lumen organelle endoplasmic reticulum cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR050757	Collagen-modifying Glycosyltransferase 25	Family
A, B	IPR029044	Nucleotide-diphospho-sugar transferases	Homologous Superfamily
A, B	IPR002654	Glycosyl transferase, family 25	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q8NBJ5	amyotrophic lateral sclerosis glioblastoma osteosarcoma tuberculosis breast cancer IgA glomerulonephritis ovarian cancer diabetes mellitus lung carcinoma pancreatic intraductal papillary-mucinous neoplasm

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.