9E6Q | pdb_00009e6q

Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AF]Large ribosomal subunit protein eL8
H [auth AE]Large ribosomal subunit protein uL6
G [auth AD]Large ribosomal subunit protein uL5
F [auth AC]Large ribosomal subunit protein uL4
E [auth AB]Large ribosomal subunit protein uL3
D [auth AA]Large ribosomal subunit protein uL2
NA [auth Ak]PaREP1 domain containing protein- - -
MA [auth Aj]DJ-1/PfpI domain-containing protein- -
LA [auth Ai]Large ribosomal subunit protein eL43
KA [auth Ah]eL42
JA [auth Ag]Large ribosomal subunit protein eL40
IA [auth Af]Large ribosomal subunit protein eL39
HA [auth Ae]LSU ribosomal protein L38E
GA [auth Ad]Large ribosomal subunit protein eL37
FA [auth Ac]Large ribosomal subunit protein eL34
EA [auth Ab]Large ribosomal subunit protein eL32
C [auth 3]Putative signal-transduction protein with CBS domains- - -
DA [auth Aa]Large ribosomal subunit protein eL31
CA [auth AZ]Large ribosomal subunit protein eL30
BA [auth AY]Large ribosomal subunit protein uL30
AA [auth AX]Large ribosomal subunit protein uL29
Z [auth AW]Large ribosomal subunit protein eL24
Y [auth AV]Large ribosomal subunit protein uL24
X [auth AU]Large ribosomal subunit protein uL23
W [auth AT]Large ribosomal subunit protein uL22
V [auth AS]Large ribosomal subunit protein eL21
U [auth AR]Large ribosomal subunit protein eL20
B [auth 2]5S rRNA---
T [auth AQ]Large ribosomal subunit protein eL19
S [auth AP]Large ribosomal subunit protein eL18
R [auth AO]Large ribosomal subunit protein uL18
Q [auth AN]Large ribosomal subunit protein uL16
P [auth AM]50S ribosomal protein L15e
O [auth AL]Large ribosomal subunit protein uL15
M [auth AJ],
N [auth AK]		eL14
L [auth AI]Large ribosomal subunit protein uL14
K [auth AH]Large ribosomal subunit protein eL13
J [auth AG]Large ribosomal subunit protein uL13
A [auth 1]23S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AF]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
I [auth AF]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
I [auth AF]IPR022481Large ribosomal subunit protein eL8, archaeaFamily
I [auth AF]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
I [auth AF]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
I [auth AF]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
H [auth AE]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
H [auth AE]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
H [auth AE]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
H [auth AE]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth AD]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
G [auth AD]IPR022804Large ribosomal subunit protein uL5, archaeaFamily
G [auth AD]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
G [auth AD]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
G [auth AD]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
G [auth AD]IPR002132Large ribosomal subunit protein uL5Family
F [auth AC]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
F [auth AC]IPR002136Large ribosomal subunit protein uL4Family
F [auth AC]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
F [auth AC]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
F [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
E [auth AB]IPR019928Large ribosomal subunit protein uL3, archaeaFamily
E [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth AB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth AB]IPR000597Large ribosomal subunit protein uL3Family
E [auth AB]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
D [auth AA]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
D [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth AA]IPR002171Large ribosomal subunit protein uL2Family
MA [auth Aj]IPR029062Class I glutamine amidotransferase-likeHomologous Superfamily
MA [auth Aj]IPR002818DJ-1/PfpIDomain
MA [auth Aj]IPR050325Protein/nucleic acid deglycaseFamily
LA [auth Ai]IPR002674Large ribosomal subunit protein eL43Family
LA [auth Ai]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth Ai]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LA [auth Ai]IPR050522Eukaryotic ribosomal protein eL43Family
KA [auth Ah]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
KA [auth Ah]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KA [auth Ah]IPR000552Large ribosomal subunit protein eL42Family
JA [auth Ag]IPR023657Large ribosomal subunit protein eL40, archaeaFamily
JA [auth Ag]IPR001975Large ribosomal subunit protein eL40 domainDomain
JA [auth Ag]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
JA [auth Ag]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IA [auth Af]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
IA [auth Af]IPR000077Large ribosomal subunit protein eL39Family
IA [auth Af]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
HA [auth Ae]IPR002675Large ribosomal subunit protein eL38Family
HA [auth Ae]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
GA [auth Ad]IPR001569Large ribosomal subunit protein eL37Family
GA [auth Ad]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
GA [auth Ad]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth Ad]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
FA [auth Ac]IPR008195Large ribosomal subunit protein eL34Family
FA [auth Ac]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
FA [auth Ac]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
FA [auth Ac]IPR047868Large ribosomal subunit protein eL34, eukaryota/archaeaFamily
EA [auth Ab]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
EA [auth Ab]IPR023654Large ribosomal subunit protein eL32, archaeaFamily
EA [auth Ab]IPR001515Large ribosomal subunit protein eL32Family
C [auth 3]IPR051257Diverse Function CBS-Domain-Containing ProteinFamily
C [auth 3]IPR046342CBS domain superfamilyHomologous Superfamily
C [auth 3]IPR000644CBS domainDomain
DA [auth Aa]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
DA [auth Aa]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
DA [auth Aa]IPR000054Large ribosomal subunit protein eL31Family
CA [auth AZ]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
CA [auth AZ]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
CA [auth AZ]IPR000231Large ribosomal subunit protein eL30Family
CA [auth AZ]IPR039109Large ribosomal subunit protein eL30-likeFamily
CA [auth AZ]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
BA [auth AY]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BA [auth AY]IPR039699Large ribosomal subunit protein uL30Family
BA [auth AY]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
BA [auth AY]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
BA [auth AY]IPR005997Large ribosomal subunit protein uL30, archaeaFamily
AA [auth AX]IPR050063Universal ribosomal protein uL29Family
AA [auth AX]IPR001854Large ribosomal subunit protein uL29Family
AA [auth AX]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Z [auth AW]IPR011017TRASH domainDomain
Z [auth AW]IPR056366Large ribosomal subunit protein eL24Family
Z [auth AW]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Z [auth AW]IPR055345Large ribosomal subunit protein eL24-like, archaeaFamily
Z [auth AW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Z [auth AW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Y [auth AV]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
Y [auth AV]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
Y [auth AV]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth AV]IPR005824KOWDomain
Y [auth AV]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth AV]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
X [auth AU]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
X [auth AU]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
X [auth AU]IPR019985Large ribosomal subunit protein uL23Family
X [auth AU]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
X [auth AU]IPR013025Large ribosomal subunit protein uL23-likeFamily
W [auth AT]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
W [auth AT]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
W [auth AT]IPR001063Large ribosomal subunit protein uL22Family
V [auth AS]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth AS]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
V [auth AS]IPR022856Large ribosomal subunit protein eL21, archaeaFamily
V [auth AS]IPR001147Large ribosomal subunit protein eL21Family
V [auth AS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth AR]IPR028877Large ribosomal subunit protein eL20Family
U [auth AR]IPR023573Large ribosomal subunit protein eL20 domainDomain
T [auth AQ]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth AQ]IPR057259Ribosomal protein L19e, N-terminal domainDomain
T [auth AQ]IPR039547Large ribosomal subunit protein eL19Family
T [auth AQ]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth AQ]IPR057260Ribosomal protein L19e, C-terminal domainDomain
T [auth AQ]IPR000196Large ribosomal subunit protein eL19 domainDomain
T [auth AQ]IPR033936Large ribosomal subunit protein eL19, archaeaDomain
S [auth AP]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
S [auth AP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth AP]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
S [auth AP]IPR000039Large ribosomal subunit protein eL18Family
S [auth AP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
R [auth AO]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
Q [auth AN]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
Q [auth AN]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
Q [auth AN]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
Q [auth AN]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
Q [auth AN]IPR016180Large ribosomal subunit protein uL16 domainDomain
Q [auth AN]IPR047873Large ribosomal subunit protein uL16Family
P [auth AM]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth AM]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth AM]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth AM]IPR000439Large ribosomal subunit protein eL15Family
O [auth AL]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
O [auth AL]IPR021131Large ribosomal subunit protein uL15/eL18Domain
O [auth AL]IPR030878Large ribosomal subunit protein uL15Family
O [auth AL]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
O [auth AL]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth AJ],
N [auth AK]		IPR039660Large ribosomal subunit protein eL14Family
M [auth AJ],
N [auth AK]		IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
M [auth AJ],
N [auth AK]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
M [auth AJ],
N [auth AK]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth AJ],
N [auth AK]		IPR023651Large ribosomal subunit protein eL14, archaeaFamily
L [auth AI]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
L [auth AI]IPR000218Large ribosomal subunit protein uL14Family
L [auth AI]IPR019971Large ribosomal subunit protein uL14, archaeaFamily
L [auth AI]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
K [auth AH]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
K [auth AH]IPR001380Large ribosomal subunit protein eL13Family
K [auth AH]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
J [auth AG]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth AG]IPR005822Large ribosomal subunit protein uL13Family
J [auth AG]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
J [auth AG]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth AG]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily