Cryo-EM structure of 96 nm repeat of microtubule doublet from T. brucei flagellum
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| TA [auth 0t] | p450 | e9e5c0t1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: p450 | ECOD (v295.2) |
| UA [auth 0u] | p450 | e9e5c0u1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: p450 | ECOD (v295.2) |
| ZA [auth 0z] | Enolase_C, MAAL_C | e9e5c0z1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Enolase_C, MAAL_C | ECOD (v295.2) |
| CC [auth 1c] | WD40, CFAP43_N | e9e5c1c1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: WD40, CFAP43_N | ECOD (v295.2) |
| CC [auth 1c] | CoV_S2 | e9e5c1c2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CoV_S2 | ECOD (v295.2) |
| DC [auth 1d] | FAD_binding_6 | e9e5c1d2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: FAD_binding_6 | ECOD (v295.2) |
| IC [auth 1i] | LRR_4, LRR_6, LRR_9 | e9e5c1i1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: LRR_4, LRR_6, LRR_9 | ECOD (v295.2) |
| LC [auth 1l] | PLDc_2, PLDc_3 | e9e5c1l1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PLDc_2, PLDc_3 | ECOD (v295.2) |
| MC [auth 1m] | ANF_receptor | e9e5c1m1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ANF_receptor | ECOD (v295.2) |
| PC [auth 1p] | Response_reg | e9e5c1p3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: Response_reg | ECOD (v295.2) |
| QC [auth 1r] | CFAP43_N | e9e5c1r1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CFAP43_N | ECOD (v295.2) |
| QC [auth 1r] | WD40_CFAP43 | e9e5c1r2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: WD40_CFAP43 | ECOD (v295.2) |
| QC [auth 1r] | PemK_toxin | e9e5c1r4 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PemK_toxin | ECOD (v295.2) |
| RC [auth 1t] | Ribosomal_L7Ae | e9e5c1t1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: Ribosomal_L7Ae | ECOD (v295.2) |
| UC [auth 2C] | e9e5c2C1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| SD [auth 2a] | Beta-lactamase2 | e9e5c2a1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-lactamase2 | ECOD (v295.2) |
| EE [auth 2m] | DevR | e9e5c2m3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: DevR | ECOD (v295.2) |
| IE [auth 2q] | COesterase, BD-FAE | e9e5c2q2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: COesterase, BD-FAE | ECOD (v295.2) |
| ME [auth 2u] | e9e5c2u1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| CF [auth 3K] | e9e5c3K1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| CF [auth 3K] | e9e5c3K3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| VF [auth 3d] | Peripla_BP_3 | e9e5c3d1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Peripla_BP_3 | ECOD (v295.2) |
| AG [auth 3i] | Cry1Ac_D5 | e9e5c3i2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Cry1Ac_D5 | ECOD (v295.2) |
| BG [auth 3j] | Methyltransf_10 | e9e5c3j1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: Methyltransf_10 | ECOD (v295.2) |
| CG [auth 3k] | LRR_6, LRR_NLRC3 | e9e5c3k1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: LRR_6, LRR_NLRC3 | ECOD (v295.2) |
| GG [auth 3p] | e9e5c3p3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| HG [auth 3q] | e9e5c3q2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| GI [auth 4p] | e9e5c4p1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| NI [auth 4w] | Beta-lactamase | e9e5c4w3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-lactamase | ECOD (v295.2) |
| PI [auth 4y] | MORN | e9e5c4y1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: MORN | ECOD (v295.2) |
| TJ [auth 5c] | CFAP251_N | e9e5c5c1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CFAP251_N | ECOD (v295.2) |
| TJ [auth 5c] | CFAP251_C | e9e5c5c2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: CFAP251_C | ECOD (v295.2) |
| UJ [auth 5d] | e9e5c5d1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| UJ [auth 5d] | e9e5c5d2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| AK [auth 5j] | e9e5c5j3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| BK [auth 5k] | PYC_OADA | e9e5c5k5 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PYC_OADA | ECOD (v295.2) |
| CK [auth 5l] | e9e5c5l1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| DK [auth 5m] | HD,HD_assoc_2 | e9e5c5m1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: HD,HD_assoc_2 | ECOD (v295.2) |
| FK [auth 5o] | Ank, Ank_2, Ank_3, Ank_4, Ank_5 | e9e5c5o1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Ank, Ank_2, Ank_3, Ank_4, Ank_5 | ECOD (v295.2) |
| GK [auth 5p] | V-set | e9e5c5p1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: V-set | ECOD (v295.2) |
| PK [auth 5y] | Tctex-1 | e9e5c5y1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Tctex-1 | ECOD (v295.2) |
| QL [auth 6a] | TPP_enzyme_C | e9e5c6a3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: TPP_enzyme_C | ECOD (v295.2) |
| RL [auth 6b] | adh_short | e9e5c6b1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: adh_short | ECOD (v295.2) |
| SL [auth 6c] | NPR2 | e9e5c6c5 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: NPR2 | ECOD (v295.2) |
| UL [auth 6e] | Ribosomal_L4 | e9e5c6e5 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Ribosomal_L4 | ECOD (v295.2) |
| XL [auth 6h] | p450 | e9e5c6h3 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: p450 | ECOD (v295.2) |
| ZL [auth 6j] | Peripla_BP_3 | e9e5c6j2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Peripla_BP_3 | ECOD (v295.2) |
| BM [auth 6l] | Ax_dynein_light | e9e5c6l1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: Ax_dynein_light | ECOD (v295.2) |
| EM [auth 6o] | e9e5c6o1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| GM [auth 6q] | e9e5c6q1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: Hypothetical protein YqbG-like | F: | ECOD (v295.2) | |
| HM [auth 6r] | AAA_lid_3 | e9e5c6r1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_3 | ECOD (v295.2) |
| IM [auth 6s] | OPA1_C | e9e5c6s1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: OPA1_C | ECOD (v295.2) |
| JM [auth 6t] | EF-hand_1, EF-hand_6, EF-hand_7 | e9e5c6t1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: EF-hand_1, EF-hand_6, EF-hand_7 | ECOD (v295.2) |
| KM [auth 6u] | Myb_DNA-binding | e9e5c6u1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Myb_DNA-binding | ECOD (v295.2) |
| LN [auth 7a] | HD_assoc | e9e5c7a7 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: HD_assoc | ECOD (v295.2) |
| MN [auth 7b] | Dynein_C | e9e5c7b4 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Dynein_C | ECOD (v295.2) |
| RN [auth 7g] | LRR_6, LRR_NLRC3 | e9e5c7g2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: LRR_6, LRR_NLRC3 | ECOD (v295.2) |
| SN [auth 7h] | polyprenyl_synt | e9e5c7h2 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: polyprenyl_synt | ECOD (v295.2) |
| UN [auth 7j] | Dynein_light | e9e5c7j1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Dynein_light | ECOD (v295.2) |
| ZJ [auth 5i] | TIR | e9e5c5i1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: TIR | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13879 | Hemingway/CFA97 (Hmw_CFAP97) | Hemingway/CFA97 | - | Family | |
| PF06565 | DM10 domain (DM10_dom) | DM10 domain | This entry represents the DM10 domain, which consists of approximately 105 residues whose function is unknown. It has been identified in nucleoside diphosphate kinases, namely Nucleoside diphosphate kinase 7 (NDK7), which contain a single copy of the ... | Domain | |
| PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain | ||
| G [auth 0G], H [auth 0H], I [auth 0I] | PF06565 | DM10 domain (DM10_dom) | DM10 domain | This entry represents the DM10 domain, which consists of approximately 105 residues whose function is unknown. It has been identified in nucleoside diphosphate kinases, namely Nucleoside diphosphate kinase 7 (NDK7), which contain a single copy of the ... | Domain |
| J [auth 0J], K [auth 0K], L [auth 0L] | PF06565 | DM10 domain (DM10_dom) | DM10 domain | This entry represents the DM10 domain, which consists of approximately 105 residues whose function is unknown. It has been identified in nucleoside diphosphate kinases, namely Nucleoside diphosphate kinase 7 (NDK7), which contain a single copy of the ... | Domain |
| PF13516 | Leucine Rich repeat (LRR_6) | Leucine Rich repeat | - | Repeat | |
| PF07004 | Sperm-tail PG-rich repeat (SHIPPO-rpt) | Sperm-tail PG-rich repeat | - | Repeat | |
| U [auth 0U], V [auth 0V], W [auth 0W], X [auth 0X] | PF13516 | Leucine Rich repeat (LRR_6) | Leucine Rich repeat | - | Repeat |
| U [auth 0U], V [auth 0V], W [auth 0W], X [auth 0X] | PF13868 | Trichohyalin-plectin-homology domain (TPH) | Trichohyalin-plectin-homology domain | - | Coiled-coil |
| AB [auth 1A], BB [auth 1B], Y [auth 0Y], Z [auth 0Z] | PF14713 | Domain of unknown function (DUF4464) (DUF4464) | Domain of unknown function (DUF4464) | - | Family |
| AB [auth 1A], BB [auth 1B], Y [auth 0Y], Z [auth 0Z] | PF21771 | CFAP58 central coiled coil (CFAP58_CC) | CFAP58 central coiled coil | - | Coiled-coil |
| AB [auth 1A], BB [auth 1B], Y [auth 0Y], Z [auth 0Z] | PF13868 | Trichohyalin-plectin-homology domain (TPH) | Trichohyalin-plectin-homology domain | - | Coiled-coil |
| CB [auth 1C], DB [auth 1D], GB [auth 1G] | PF14772 | Sperm tail (NYD-SP28) | Sperm tail | - | Family |
| CB [auth 1C], DB [auth 1D], GB [auth 1G] | PF00334 | Nucleoside diphosphate kinase (NDK) | Nucleoside diphosphate kinase | Domain | |
| EB [auth 1E], FB [auth 1F] | PF13870 | CCDC113/CCDC96, coiled-coil (CCDC113_CCDC96_CC) | CCDC113/CCDC96, coiled-coil | - | Coiled-coil |
| EB [auth 1E], FB [auth 1F] | PF00334 | Nucleoside diphosphate kinase (NDK) | Nucleoside diphosphate kinase | Domain | |
| HB [auth 1H], IB [auth 1I] | PF14580 | Leucine-rich repeat (LRR_9) | Leucine-rich repeat | - | Repeat |
| HB [auth 1H], IB [auth 1I] | PF14772 | Sperm tail (NYD-SP28) | Sperm tail | - | Family |
| JB [auth 1J], KB [auth 1K] | PF13851 | Growth-arrest specific micro-tubule binding (GAS) | Growth-arrest specific micro-tubule binding | - | Coiled-coil |
| LB [auth 1L], MB [auth 1M] | PF13516 | Leucine Rich repeat (LRR_6) | Leucine Rich repeat | - | Repeat |
| RB [auth 1R], SB [auth 1S] | PF23185 | CFAP43 N-terminal domain (CFAP43_N) | CFAP43 N-terminal domain | - | Repeat |
| TB [auth 1T], UB [auth 1U], VB [auth 1V] | PF24569 | Cilia- and flagella-associated protein 161-like domain (CFAP161) | Cilia- and flagella-associated protein 161-like domain | This domain is found in human Cilia- and flagella-associated protein 161 (CFAP161) and in similar animal proteins. CFAP161 is a microtubule inner protein (MIP) part of the dynein- decorated doublet microtubules (DMTs) in cilia axoneme, that is requir ... | Domain |
| SC [auth 2A], TC [auth 2B], UC [auth 2C] | PF02493 | MORN repeat (MORN) | MORN repeat | - | Repeat |
| VC [auth 2D], WC [auth 2E], XC [auth 2F] | PF05186 | Dpy-30 motif (Dpy-30) | Dpy-30 motif | - | Motif |
| VC [auth 2D], WC [auth 2E], XC [auth 2F] | PF02493 | MORN repeat (MORN) | MORN repeat | - | Repeat |
| AD [auth 2I], YC [auth 2G], ZC [auth 2H] | PF05186 | Dpy-30 motif (Dpy-30) | Dpy-30 motif | - | Motif |
| BD [auth 2J], CD [auth 2K], DD [auth 2L] | PF06098 | Radial spoke protein 3 (Radial_spoke_3) | Radial spoke protein 3 | - | Family |
| ED [auth 2M], FD [auth 2N], GD [auth 2O] | PF04712 | Radial spokehead-like protein (Radial_spoke) | Radial spokehead-like protein | - | Family |
| HD [auth 2P], ID [auth 2Q] | PF04712 | Radial spokehead-like protein (Radial_spoke) | Radial spokehead-like protein | - | Family |
| PD [auth 2X], QD [auth 2Y], RD [auth 2Z], VE [auth 3D] | PF25325 | EFHB C-terminal EF-hand domain (EF-hand_EFHB_C) | EFHB C-terminal EF-hand domain | This entry represents the C-terminal EF-hand domain found in EFHB (EF-hand domain-containing family member B) proteins. EF-hand domains are helix-loop-helix structural motifs that typically bind calcium ions. | Domain |
| PD [auth 2X], QD [auth 2Y], RD [auth 2Z], VE [auth 3D] | PF02493 | MORN repeat (MORN) | MORN repeat | - | Repeat |
| AF [auth 3I], WE [auth 3E], XE [auth 3F], YE [auth 3G], ZE [auth 3H] | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ... | Domain |
| AF [auth 3I], WE [auth 3E], XE [auth 3F], YE [auth 3G], ZE [auth 3H] | PF02493 | MORN repeat (MORN) | MORN repeat | - | Repeat |
| BF [auth 3J], CF [auth 3K], DF [auth 3L] | PF00226 | DnaJ domain (DnaJ) | DnaJ domain | DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ... | Domain |
| BF [auth 3J], CF [auth 3K], DF [auth 3L] | PF13516 | Leucine Rich repeat (LRR_6) | Leucine Rich repeat | - | Repeat |
| BF [auth 3J], CF [auth 3K], DF [auth 3L] | PF01556 | DnaJ C terminal domain (DnaJ_C) | DnaJ C terminal domain | This family consists of the C terminal region of the DnaJ protein. It is always found associated with Pfam:PF00226 and Pfam:PF00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after ... | Domain |
| PF00226 | DnaJ domain (DnaJ) | DnaJ domain | DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ... | Domain | |
| PF10274 | Parkin co-regulated protein (ParcG) | Parkin co-regulated protein | - | Repeat | |
| PF05186 | Dpy-30 motif (Dpy-30) | Dpy-30 motif | - | Motif | |
| PF01556 | DnaJ C terminal domain (DnaJ_C) | DnaJ C terminal domain | This family consists of the C terminal region of the DnaJ protein. It is always found associated with Pfam:PF00226 and Pfam:PF00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after ... | Domain | |
| MF [auth 3U], NF [auth 3V], OF [auth 3W], PF [auth 3X], QF [auth 3Y] | PF10274 | Parkin co-regulated protein (ParcG) | Parkin co-regulated protein | - | Repeat |
| MF [auth 3U], NF [auth 3V], OF [auth 3W], PF [auth 3X], QF [auth 3Y] | PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | |
| PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | ||
| PF05018 | CFA20 domain (CFA20_dom) | CFA20 domain | This domain is characteristic of cilia- and flagella-associated protein 20 (CFA20). CFA20 is a cilium- and flagellum-specific protein that plays a role in axonemal structure organisation and motility [1,2]. In Chlamydomonas reinhardtii, it stabilises ... | Domain | |
| PF13768 | von Willebrand factor type A domain (VWA_3) | von Willebrand factor type A domain | Domain | ||
| PF13516 | Leucine Rich repeat (LRR_6) | Leucine Rich repeat | - | Repeat | |
| PF00173 | Cytochrome b5-like Heme/Steroid binding domain (Cyt-b5) | Cytochrome b5-like Heme/Steroid binding domain | This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors such as Swiss:O00264 [1,2]. Many members of this subfamily are membrane a ... | Domain | |
| PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
| MH [auth 4V], NH [auth 4W], OH [auth 4X], PH [auth 4Y], QH [auth 4Z] | PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain | |
| MH [auth 4V], NH [auth 4W], OH [auth 4X], PH [auth 4Y], QH [auth 4Z] | PF13864 | Calmodulin-binding (Enkurin) | Calmodulin-binding | - | Family |
| MH [auth 4V], NH [auth 4W], OH [auth 4X], PH [auth 4Y], QH [auth 4Z] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| MH [auth 4V], NH [auth 4W], OH [auth 4X], PH [auth 4Y], QH [auth 4Z] | PF12018 | Domain of unknown function (FAP206) | Domain of unknown function | - | Family |
| MH [auth 4V], NH [auth 4W], OH [auth 4X], PH [auth 4Y], QH [auth 4Z] | PF00225 | Kinesin motor domain (Kinesin) | Kinesin motor domain | Domain | |
| RI [auth 5A], SI [auth 5B] | PF13864 | Calmodulin-binding (Enkurin) | Calmodulin-binding | - | Family |
| PF08385 | Dynein heavy chain, N-terminal region 1 (DHC_N1) | Dynein heavy chain, N-terminal region 1 | - | Family | |
| PF16092 | Cilia- and flagella-associated protein 61, N-terminal domain (CFAP61_N) | Cilia- and flagella-associated protein 61, N-terminal domain | This entry represents the N-terminal domain of proteins described as cilia- and flagella-associated protein. Proteins containing this domain includes FAP61 from Chlamydomonas reinhardtii. FAP61 is part of the calmodulin and spoke-associated complex ( ... | Domain | |
| PF13868 | Trichohyalin-plectin-homology domain (TPH) | Trichohyalin-plectin-homology domain | - | Coiled-coil | |
| PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | ||
| CJ [auth 5L], DJ [auth 5M] | PF18289 | CCDC81 eukaryotic HU domain 2 (HU-CCDC81_euk_2) | CCDC81 eukaryotic HU domain 2 | This is the second of two HU domains found in the CCDC81-like proteins. CCDC81 has been experimentally linked to the centrosome; eukaryotic CCDC81 HU domains are predicted to function in protein-protein interactions in centrosome organization and pot ... | Domain |
| CJ [auth 5L], DJ [auth 5M] | PF14908 | CCDC81 eukaryotic HU domain 1 (HU-CCDC81_euk_1) | CCDC81 eukaryotic HU domain 1 | This is the first of two HU domains found in the CCDC81-like proteins. CCDC81 has been experimentally linked to the centrosome; eukaryotic CCDC81 HU domains are predicted to function in protein-protein interactions in centrosome organization and pote ... | Domain |
| EJ [auth 5N], FJ [auth 5O], GJ [auth 5P], HJ [auth 5Q], IJ [auth 5R] | PF12796 | Ankyrin repeats (3 copies) (Ank_2) | Ankyrin repeats (3 copies) | - | Repeat |
| EJ [auth 5N], FJ [auth 5O], GJ [auth 5P], HJ [auth 5Q], IJ [auth 5R] | PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain |
| EJ [auth 5N], FJ [auth 5O], GJ [auth 5P], HJ [auth 5Q], IJ [auth 5R] | PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain |
| PJ [auth 5Y], QJ [auth 5Z], QK [auth 6A] | PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain |
| PF10211 | Axonemal dynein light chain (Ax_dynein_light) | Axonemal dynein light chain | - | Family | |
| PF00022 | Actin (Actin) | Actin | - | Family | |
| PF13833 | EF-hand domain pair (EF-hand_8) | EF-hand domain pair | Domain | ||
| PF13405 | EF-hand domain (EF-hand_6) | EF-hand domain | Domain | ||
| PF08385 | Dynein heavy chain, N-terminal region 1 (DHC_N1) | Dynein heavy chain, N-terminal region 1 | - | Family | |
| PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | ||
| PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain | |
| PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain | ||
| PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
| WM [auth 7L], XM [auth 7M] | PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain |
| AN [auth 7P], YM [auth 7N], ZM [auth 7O] | PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | |
| BN [auth 7Q], CN [auth 7R], DN [auth 7S] | PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | |
| BN [auth 7Q], CN [auth 7R], DN [auth 7S] | PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain |
| BN [auth 7Q], CN [auth 7R], DN [auth 7S] | PF22589 | Sperm microtubule inner protein 1 (SPMIP1) | Sperm microtubule inner protein 1 | - | Family |
| EN [auth 7T], FN [auth 7U], QO [auth 8L] | PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain |
| PF08385 | Dynein heavy chain, N-terminal region 1 (DHC_N1) | Dynein heavy chain, N-terminal region 1 | - | Family | |
| PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | ||
| PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain | |
| PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
| PF21773 | ODAD1 central coiled coil region (ODAD1_CC) | ODAD1 central coiled coil region | This domain, previously know as DUF6872, is found in Outer dynein arm-docking complex subunit 1 (ODAD1, CCDC114) from humans and similar eukaryotic proteins. In mammals, CCDC114 forms a hetero-coiled coil with ODAD1/CCDC151 within the A07/A08 interpr ... | Domain | |
| PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | ||
| PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain | |
| PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain | |
| PF21773 | ODAD1 central coiled coil region (ODAD1_CC) | ODAD1 central coiled coil region | This domain, previously know as DUF6872, is found in Outer dynein arm-docking complex subunit 1 (ODAD1, CCDC114) from humans and similar eukaryotic proteins. In mammals, CCDC114 forms a hetero-coiled coil with ODAD1/CCDC151 within the A07/A08 interpr ... | Domain | |
| AQ [auth 9D], BQ [auth 9E], ZP [auth 9C] | PF08385 | Dynein heavy chain, N-terminal region 1 (DHC_N1) | Dynein heavy chain, N-terminal region 1 | - | Family |
| CQ [auth 9F], DQ [auth 9G], EQ [auth 9H], FQ [auth 9I] | PF08385 | Dynein heavy chain, N-terminal region 1 (DHC_N1) | Dynein heavy chain, N-terminal region 1 | - | Family |
| CQ [auth 9F], DQ [auth 9G], EQ [auth 9H], FQ [auth 9I] | PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain |
| CQ [auth 9F], DQ [auth 9G], EQ [auth 9H], FQ [auth 9I] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| GQ [auth 9J], HQ [auth 9K], IQ [auth 9L] | PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | |
| GQ [auth 9J], HQ [auth 9K], IQ [auth 9L] | PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain |
| GQ [auth 9J], HQ [auth 9K], IQ [auth 9L] | PF15239 | Cilia-and flagella-associated protein 96 (CFAP96-like) | Cilia-and flagella-associated protein 96 | - | Family |
| PF01221 | Dynein light chain type 1 (Dynein_light) | Dynein light chain type 1 | Domain | ||
| PF03645 | Tctex-1 family (Tctex-1) | Tctex-1 family | Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. | Domain | |
| PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain | |
| QQ [auth 9T], RQ [auth 9U], SQ [auth 9V] | PF21773 | ODAD1 central coiled coil region (ODAD1_CC) | ODAD1 central coiled coil region | This domain, previously know as DUF6872, is found in Outer dynein arm-docking complex subunit 1 (ODAD1, CCDC114) from humans and similar eukaryotic proteins. In mammals, CCDC114 forms a hetero-coiled coil with ODAD1/CCDC151 within the A07/A08 interpr ... | Domain |
| PF00091 | Tubulin/FtsZ family, GTPase domain (Tubulin) | Tubulin/FtsZ family, GTPase domain | This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ... | Domain | |
| PF03953 | Tubulin C-terminal domain (Tubulin_C) | Tubulin C-terminal domain | This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ... | Domain | |
| PF00091 | Tubulin/FtsZ family, GTPase domain (Tubulin) | Tubulin/FtsZ family, GTPase domain | This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ... | Domain | |
| PF03953 | Tubulin C-terminal domain (Tubulin_C) | Tubulin C-terminal domain | This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ... | Domain | |














