9E3R | pdb_00009e3r

Cryo-EM structure of PWWP domain deleted DNMT 3A2/3B3 in complex with a di-nucleosome

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
E,
I [auth M],
M [auth Q]		Histone H3.2
B,
F,
J [auth N],
N [auth R]		Histone H4
C,
G,
K [auth O],
O [auth S]		Histone H2A---
D,
H,
L [auth P],
P [auth T]		Histone H2B
Q [auth I]DNA (320-MER)---
R [auth J]DNA (319-MER)---
S [auth V],
T [auth Z],
W [auth L],
X		Isoform 3 of DNA (cytosine-5)-methyltransferase 3B
U,
V [auth Y],
Y [auth W],
Z [auth K]		DNA (cytosine-5)-methyltransferase 3A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
E,
I [auth M],
M [auth Q]		IPR009072Histone-foldHomologous Superfamily
A,
E,
I [auth M],
M [auth Q]		IPR007125Core Histone H2A/H2B/H3 domainDomain
A,
E,
I [auth M],
M [auth Q]		IPR000164Histone H3/CENP-AFamily
B,
F,
J [auth N],
N [auth R]		IPR009072Histone-foldHomologous Superfamily
B,
F,
J [auth N],
N [auth R]		IPR035425CENP-T/Histone H4, histone foldDomain
B,
F,
J [auth N],
N [auth R]		IPR001951Histone H4Family
B,
F,
J [auth N],
N [auth R]		IPR019809Histone H4, conserved siteConserved Site
B,
F,
J [auth N],
N [auth R]		IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
D,
H,
L [auth P],
P [auth T]		IPR009072Histone-foldHomologous Superfamily
D,
H,
L [auth P],
P [auth T]		IPR000558Histone H2BFamily
D,
H,
L [auth P],
P [auth T]		IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
D,
H,
L [auth P],
P [auth T]		IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
D,
H,
L [auth P],
P [auth T]		IPR007125Core Histone H2A/H2B/H3 domainDomain
D,
H,
L [auth P],
P [auth T]		IPR055333Histone H2B, conserved siteConserved Site
D,
H,
L [auth P],
P [auth T]		IPR005818Linker histone H1/H5, domain H15Domain
S [auth V],
T [auth Z],
W [auth L],
X		IPR040552DNMT3, cysteine rich ADD domain, GATA1-like zinc fingerDomain
S [auth V],
T [auth Z],
W [auth L],
X		IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
S [auth V],
T [auth Z],
W [auth L],
X		IPR049554DNMT3, ADD domain, PHD zinc fingerDomain
S [auth V],
T [auth Z],
W [auth L],
X		IPR050390DNA Cytosine-5 MethyltransferaseFamily
S [auth V],
T [auth Z],
W [auth L],
X		IPR000313PWWP domainDomain
S [auth V],
T [auth Z],
W [auth L],
X		IPR030488DNA (cytosine-5)-methyltransferase 3B, ADD domainDomain
S [auth V],
T [auth Z],
W [auth L],
X		IPR018117DNA methylase, C-5 cytosine-specific, active siteActive Site
S [auth V],
T [auth Z],
W [auth L],
X		IPR001525C-5 cytosine methyltransferaseFamily
S [auth V],
T [auth Z],
W [auth L],
X		IPR011011Zinc finger, FYVE/PHD-typeHomologous Superfamily
S [auth V],
T [auth Z],
W [auth L],
X		IPR025766ADD domainDomain
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR040552DNMT3, cysteine rich ADD domain, GATA1-like zinc fingerDomain
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR044108DNA (cytosine-5)-methyltransferase 3A, ADD domainDomain
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR000313PWWP domainDomain
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR018117DNA methylase, C-5 cytosine-specific, active siteActive Site
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR049554DNMT3, ADD domain, PHD zinc fingerDomain
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR001525C-5 cytosine methyltransferaseFamily
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR054724DNA (cytosine-5)-methyltransferase, N-terminalDomain
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR025766ADD domainDomain
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
U,
V [auth Y],
Y [auth W],
Z [auth K]		IPR050390DNA Cytosine-5 MethyltransferaseFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
E,
I [auth M],
M [auth Q]		Pharos:  Q71DI3
B,
F,
J [auth N],
N [auth R]		Pharos:  P62805
S [auth V],
T [auth Z],
W [auth L],
X		Pharos:  Q9UBC3
U,
V [auth Y],
Y [auth W],
Z [auth K]		Pharos:  Q9Y6K1