Cryo EM structure of pertussis toxin in complex with neutralizing Fab PERT-171
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F | SCOP2B Superfamily | Bacterial enterotoxins | 8041863 | 3000434 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Bacterial enterotoxins | 8041862 | 3000434 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Bacterial enterotoxins | 8041862 | 3000434 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| H [auth L] | IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | e9e3jL1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | ECOD (v295.2) |
| G [auth H] | IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | e9e3jH1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | ECOD (v295.2) |
| F | PCI | e9e3jF1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| E | PCI | e9e3jE1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| D | PCI | e9e3jD1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| C | PCI | e9e3jC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| B | PCI | e9e3jB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| A | PCI | e9e3jA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| H [auth L] | PERT-171 LC | - | - | - |
| G [auth H] | PERT-171 HC | - | - | - |
| Pertussis toxin subunit 5 | - | - | ||
| Pertussis toxin subunit 4 | - | - | ||
| Pertussis toxin subunit 3 | - | - | ||
| Islet-activating protein S2 | - | - | ||
| Pertussis toxin subunit 1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR015356 | Pertussis toxin, subunit S5 | Family | |
| IPR008992 | Enterotoxin | Homologous Superfamily | |
| IPR015355 | Pertussis toxin, subunit S4 | Family | |
| IPR008992 | Enterotoxin | Homologous Superfamily | |
| IPR005138 | Aerolysin/Pertussis toxin domain | Domain | |
| IPR016187 | C-type lectin fold | Homologous Superfamily | |
| IPR037015 | Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily | Homologous Superfamily | |
| IPR008992 | Enterotoxin | Homologous Superfamily | |
| IPR003899 | Bordetella pertussis toxin B | Family | |
| IPR020063 | Bordetella pertussis toxin B, subunit 2/3, C-terminal | Domain | |
| IPR005138 | Aerolysin/Pertussis toxin domain | Domain | |
| IPR016187 | C-type lectin fold | Homologous Superfamily | |
| IPR037015 | Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily | Homologous Superfamily | |
| IPR008992 | Enterotoxin | Homologous Superfamily | |
| IPR003899 | Bordetella pertussis toxin B | Family | |
| IPR020063 | Bordetella pertussis toxin B, subunit 2/3, C-terminal | Domain | |
| IPR003898 | Pertussis toxin-like | Family |