9DGT | pdb_00009dgt

structure of dynactin, dynein tail with one BICDR from dynein-dynactin-BICDR on microtubules

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
K	SCOP2B Superfamily	Subunits of heterodimeric actin filament capping protein Capz	8077311	3001499	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
T [auth V]	WD40	e9dgtV1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
S [auth U]	WD40	e9dgtU1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
L	WD40	e9dgtL1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
K	WD40	e9dgtK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
J	WD40	e9dgtJ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
H	WD40	e9dgtH1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
Y [auth d]	WD40	e9dgtd1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
X [auth c]	WD40	e9dgtc1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
I	WD40	e9dgtI1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
G	WD40	e9dgtG1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
F	WD40	e9dgtF1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
E	WD40	e9dgtE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
D	WD40	e9dgtD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
C	WD40	e9dgtC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
B	WD40	e9dgtB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
A	WD40	e9dgtA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
T [auth V]	PF21711	Dynactin subunit 5 (DCTN5)	Dynactin subunit 5	-	Repeat
O, R	PF07426	Dynactin subunit p22 (Dynactin_p22)	Dynactin subunit p22	-	Family
M, N, P, Q	PF04912	Dynamitin (Dynamitin)	Dynamitin	-	Family
L	PF01115	F-actin capping protein, beta subunit (F_actin_cap_B)	F-actin capping protein, beta subunit	-	Family
K	PF01267	F-actin capping protein alpha subunit (F-actin_cap_A)	F-actin capping protein alpha subunit	-	Family
V [auth Y]	PF05502	Dynactin p62 family (Dynactin_p62)	Dynactin p62 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
T [auth V]	Dynactin subunit 5	-	microtubule-based process cellular process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome centrosome microtubule organizing center
S [auth U]	Dynactin subunit 6	protein-containing complex binding binding dynein complex binding	microtubule cytoskeleton organization mitotic cell cycle mitotic spindle organization cellular component organization organelle organization mitotic cell cycle process cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome centrosome microtubule organizing center
O, R	Dynactin subunit 3	-	cytoskeleton-dependent cytokinesis cellular process cytokinesis cell division cell cycle cell cycle process microtubule-based process	midbody cellular anatomical structure intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton protein-containing complex actin cytoskeleton dynactin complex microtubule associated complex midbody cellular anatomical structure intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton protein-containing complex actin cytoskeleton dynactin complex microtubule associated complex chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome cytoplasm cell division site cell periphery cleavage furrow membrane plasma membrane plasma membrane region centrosome microtubule organizing center
M, N, P, Q	Dynactin subunit 2	-	microtubule cytoskeleton organization mitotic cell cycle mitotic spindle organization cellular component organization organelle organization mitotic cell cycle process cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane cytoplasm protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane cytoplasm catalytic complex dynein complex centrosome microtubule organizing center polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
L	F-actin-capping protein subunit beta	cytoskeletal protein binding actin binding protein binding binding	regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization cellular component biogenesis actin filament capping cellular component assembly actin filament-based process regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization cellular component biogenesis actin filament capping cellular component assembly actin filament-based process regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization cellular component disassembly regulation of biological process barbed-end actin filament capping negative regulation of cellular component organization actin filament organization regulation of organelle organization negative regulation of protein depolymerization negative regulation of protein-containing complex assembly regulation of protein polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process cellular component organization regulation of protein-containing complex assembly negative regulation of protein-containing complex disassembly negative regulation of cellular process protein-containing complex assembly negative regulation of protein polymerization cellular component organization or biogenesis regulation of actin filament polymerization actin polymerization or depolymerization protein polymerization regulation of actin filament organization actin cytoskeleton organization actin filament polymerization protein-containing complex organization regulation of protein depolymerization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization biological regulation regulation of cellular component biogenesis organelle organization negative regulation of organelle organization regulation of actin filament length regulation of actin cytoskeleton organization cellular process negative regulation of actin filament depolymerization protein depolymerization cytoskeleton organization regulation of anatomical structure size microtubule-based process	protein-containing complex cellular anatomical structure intracellular anatomical structure WASH complex cytoplasm intracellular membraneless organelle sarcomere intracellular organelle organelle membraneless organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer protein-containing complex cellular anatomical structure intracellular anatomical structure WASH complex cytoplasm intracellular membraneless organelle sarcomere intracellular organelle organelle membraneless organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer supramolecular complex cytoskeleton F-actin capping protein complex actin cytoskeleton
K	F-actin-capping protein subunit alpha-1	cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding	regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization cellular component biogenesis actin filament capping cellular component assembly actin filament-based process regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization cellular component biogenesis actin filament capping cellular component assembly actin filament-based process regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization cellular component disassembly regulation of biological process barbed-end actin filament capping negative regulation of cellular component organization actin filament organization regulation of organelle organization negative regulation of protein depolymerization negative regulation of protein-containing complex assembly regulation of protein polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process cellular component organization regulation of protein-containing complex assembly negative regulation of protein-containing complex disassembly negative regulation of cellular process protein-containing complex assembly negative regulation of protein polymerization cellular component organization or biogenesis regulation of actin filament polymerization actin polymerization or depolymerization protein polymerization regulation of actin filament organization actin cytoskeleton organization actin filament polymerization protein-containing complex organization regulation of protein depolymerization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization biological regulation regulation of cellular component biogenesis organelle organization negative regulation of organelle organization regulation of actin filament length regulation of actin cytoskeleton organization cellular process negative regulation of actin filament depolymerization protein depolymerization cytoskeleton organization regulation of anatomical structure size microtubule-based process	intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle F-actin capping protein complex intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol cell cortex cortical cytoskeleton intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle F-actin capping protein complex intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol cell cortex cortical cytoskeleton cell periphery
J	Actin-related protein 10	structural constituent of cytoskeleton structural molecule activity	establishment of organelle localization cellular localization organelle transport along microtubule transport localization mitochondrion localization mitochondrion transport along microtubule organelle localization establishment of localization in cell transport along microtubule axonal transport of mitochondrion establishment of mitochondrion localization retrograde axonal transport intracellular transport establishment of organelle localization cellular localization organelle transport along microtubule transport localization mitochondrion localization mitochondrion transport along microtubule organelle localization establishment of localization in cell transport along microtubule axonal transport of mitochondrion establishment of mitochondrion localization retrograde axonal transport intracellular transport axonal transport establishment of localization establishment of mitochondrion localization, microtubule-mediated axo-dendritic transport microtubule-based transport cytoskeleton-dependent intracellular transport cellular process microtubule-based movement microtubule-based process retrograde axonal transport of mitochondrion	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane-bounded organelle nucleus protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton membrane-bounded organelle nucleus intracellular membrane-bounded organelle neuron projection cytoplasm axon cell projection axon cytoplasm neuron projection cytoplasm plasma membrane bounded cell projection
H	Actin, cytoplasmic 1	structural constituent of postsynapse structural constituent of cytoskeleton structural molecule activity structural constituent of synapse structural constituent of postsynaptic actin cytoskeleton binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding structural constituent of postsynapse structural constituent of cytoskeleton structural molecule activity structural constituent of synapse structural constituent of postsynaptic actin cytoskeleton binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding enzyme regulator activity molecular function regulator activity nitric-oxide synthase regulator activity nitric-oxide synthase binding protein binding enzyme binding identical protein binding cytoskeletal protein binding kinesin binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding Tat protein binding kinase binding protein kinase binding transporter regulator activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	cellular response to nitrogen compound cellular response to stimulus response to cytochalasin B response to stimulus response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to cytochalasin B cellular response to chemical stimulus response to chemical cellular process regulation of localization import into cell cellular localization cellular response to nitrogen compound cellular response to stimulus response to cytochalasin B response to stimulus response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to cytochalasin B cellular response to chemical stimulus response to chemical cellular process regulation of localization import into cell cellular localization regulation of cellular component organization regulation of cellular process transport synaptic vesicle cycle regulation of synaptic vesicle recycling vesicle-mediated transport presynaptic endocytosis vesicle-mediated transport in synapse cellular component organization localization synaptic vesicle recycling regulation of synaptic vesicle endocytosis establishment of localization in cell cellular component organization or biogenesis regulation of endocytosis synaptic vesicle endocytosis regulation of biological process regulation of transport biological regulation establishment of localization endocytosis multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development system development developmental process plasma membrane bounded cell projection organization nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development animal gross anatomical part developmental process tissue morphogenesis epithelium development morphogenesis of a polarized epithelium morphogenesis of an epithelium tissue development regulation of DNA recombination regulation of double-strand break repair regulation of cellular response to stress positive regulation of biological process positive regulation of double-strand break repair via homologous recombination regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of response to stimulus positive regulation of metabolic process positive regulation of DNA repair cellular response to stress response to stress regulation of response to stress recombinational repair positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process double-strand break repair via homologous recombination positive regulation of cellular process DNA repair positive regulation of DNA recombination double-strand break repair DNA recombination primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process positive regulation of double-strand break repair regulation of DNA repair regulation of double-strand break repair via homologous recombination positive regulation of DNA metabolic process DNA damage response regulation of response to stimulus metabolic process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process nitrogen compound transport organic hydroxy compound transport catecholamine uptake regulation of norepinephrine uptake norepinephrine uptake establishment or maintenance of cell polarity protein localization to cell periphery regulation of protein localization protein localization to plasma membrane regulation of protein localization to cell periphery localization within membrane protein localization to membrane regulation of cellular localization macromolecule localization intracellular protein localization regulation of protein localization to plasma membrane regulation of protein localization to membrane cell motility microtubule-based process adherens junction organization adherens junction assembly cellular component biogenesis cell junction organization cellular component assembly cell junction assembly cell-cell junction assembly cell-cell junction organization transepithelial transport regulation of transepithelial transport apical protein localization protein localization to cell junction protein localization to adherens junction protein localization to cell-cell junction cell cycle regulation of cell cycle	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol apical part of cell cluster of actin-based cell projections brush border synapse cell junction glutamatergic synapse apical junction complex cell-cell junction anchoring junction adherens junction axon neuron projection axon terminus presynapse distal axon calyx of Held neuron projection terminus polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex cell cortex cortical cytoskeleton cell periphery focal adhesion cell-substrate junction postsynapse postsynaptic cytoskeleton postsynaptic actin cytoskeleton protein-containing complex catalytic complex NuA4 histone acetyltransferase complex chromatin chromosome transferase complex H4/H2A histone acetyltransferase complex histone acetyltransferase complex acetyltransferase complex H4 histone acetyltransferase complex protein acetyltransferase complex intracellular protein-containing complex dense body plasma membrane cytoplasmic ribonucleoprotein granule ribonucleoprotein granule Schaffer collateral - CA1 synapse tight junction ribonucleoprotein complex membrane-bounded organelle nucleus intracellular membrane-bounded organelle
DA [auth j], IA [auth q]	Dynein light intermediate chain	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	microtubule-based movement microtubule-based process cellular process	protein-containing complex intracellular anatomical structure cytoplasmic dynein complex catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton centrosome protein-containing complex intracellular anatomical structure cytoplasmic dynein complex catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton centrosome microtubule organizing center polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
BA [auth g], CA [auth h], GA [auth o], HA [auth p]	Cytoplasmic dynein 1 intermediate chain 2	-	microtubule-based movement microtubule-based process cellular process	protein-containing complex intracellular anatomical structure cytoplasmic dynein complex catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton polymeric cytoskeletal fiber protein-containing complex intracellular anatomical structure cytoplasmic dynein complex catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	Cytoplasmic dynein 1 heavy chain 1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding dynein light intermediate chain binding protein binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity minus-end-directed microtubule motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity dynein intermediate chain binding	cellular process cell division microtubule-based movement microtubule-based process	protein-containing complex intracellular anatomical structure catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton polymeric cytoskeletal fiber supramolecular fiber protein-containing complex intracellular anatomical structure catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
X [auth c], Y [auth d]	BICD family-like cargo adapter 1	small GTPase binding protein binding binding enzyme binding GTPase binding cytoskeletal protein binding dynactin binding	localization cellular localization transport Golgi to secretory granule transport establishment of localization in cell intracellular transport cellular process establishment of localization developmental process multicellular organismal process plasma membrane bounded cell projection organization cellular developmental process cell projection organization cell development localization cellular localization transport Golgi to secretory granule transport establishment of localization in cell intracellular transport cellular process establishment of localization developmental process multicellular organismal process plasma membrane bounded cell projection organization cellular developmental process cell projection organization cell development neuron projection development nervous system development cellular component organization generation of neurons neurogenesis multicellular organism development neuron differentiation cell differentiation neuron development anatomical structure development cellular component organization or biogenesis animal gross anatomical part developmental process system development establishment of organelle localization vesicle cytoskeletal trafficking vesicle localization organelle transport along microtubule establishment of vesicle localization vesicle transport along microtubule organelle localization microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process	intracellular organelle centrosome microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton
V [auth Y]	Dynactin subunit 4	-	microtubule-based process cellular process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton sarcomere contractile muscle fiber protein-containing complex intracellular anatomical structure intracellular membraneless organelle actin cytoskeleton dynactin complex intracellular organelle cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex microtubule cytoskeleton sarcomere contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex cell periphery cell cortex centrosome microtubule organizing center actin filament bundle actomyosin stress fiber contractile actin filament bundle
U [auth W], W [auth Z]	Dynactin subunit 1	cytoskeletal protein binding microtubule binding protein binding binding tubulin binding kinase binding enzyme binding protein kinase binding lipid sensor activity molecular sensor activity molecular function regulator activity sterol sensor activity	cellular process cell division establishment of organelle localization cellular localization transport nucleus localization intracellular transport establishment of localization localization organelle localization establishment of localization in cell nuclear migration membrane organization cellular component disassembly cellular process cell division establishment of organelle localization cellular localization transport nucleus localization intracellular transport establishment of localization localization organelle localization establishment of localization in cell nuclear migration membrane organization cellular component disassembly nuclear membrane disassembly mitotic cell cycle membrane disassembly nuclear membrane organization cellular component organization mitotic nuclear membrane disassembly nucleus organization organelle organization mitotic cell cycle process nuclear envelope organization cell cycle cellular component organization or biogenesis endomembrane system organization cell cycle process cell junction organization neuromuscular junction development synapse organization intracellular lipid transport intracellular cholesterol transport lipid localization lipid transport organic hydroxy compound transport lysosomal transport intracellular sterol transport vesicle-mediated transport macromolecule localization lysosome to ER cholesterol transport vacuolar transport cholesterol transport sterol transport positive regulation of organelle organization regulation of cytoskeleton organization regulation of microtubule polymerization or depolymerization regulation of cellular process regulation of cellular component organization positive regulation of cellular component organization microtubule cytoskeleton organization positive regulation of biological process cellular component biogenesis regulation of protein-containing complex assembly positive regulation of protein-containing complex assembly microtubule polymerization or depolymerization cellular component assembly positive regulation of protein polymerization protein-containing complex assembly positive regulation of cellular process protein polymerization regulation of biological process positive regulation of microtubule nucleation positive regulation of microtubule polymerization or depolymerization protein-containing complex organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization biological regulation regulation of microtubule-based process microtubule polymerization regulation of cellular component biogenesis positive regulation of supramolecular fiber organization regulation of microtubule nucleation regulation of organelle organization microtubule nucleation regulation of microtubule polymerization regulation of protein polymerization positive regulation of microtubule polymerization regulation of supramolecular fiber organization microtubule-based process supramolecular fiber organization cytoskeleton organization regulation of microtubule cytoskeleton organization sterol homeostasis chemical homeostasis homeostatic process cholesterol homeostasis lipid homeostasis multicellular organismal process system process nervous system process neuromuscular process organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cilium assembly non-motile cilium assembly cilium organization cell projection assembly regulation of mitotic spindle organization regulation of cell cycle microtubule cytoskeleton organization involved in mitosis spindle organization regulation of cell cycle process regulation of spindle organization mitotic spindle organization spindle localization establishment or maintenance of cell polarity establishment of mitotic spindle localization establishment of spindle localization establishment of spindle orientation establishment of cell polarity establishment of mitotic spindle orientation developmental process multicellular organism development spinal cord development central nervous system development anatomical structure development ventral spinal cord development nervous system development animal gross anatomical part developmental process system development endosomal transport cytosolic transport retrograde transport, endosome to Golgi behavior motor behavior microtubule organizing center organization centriole-centriole cohesion centrosome cycle positive regulation of neuromuscular junction development regulation of synapse organization regulation of synapse structure or activity regulation of biological quality regulation of neuromuscular junction development neuron projection maintenance neuron projection organization microtubule anchoring at microtubule organizing center microtubule anchoring at centrosome microtubule anchoring cellular homeostasis neuron cellular homeostasis	protein-containing complex cellular anatomical structure membrane membrane protein complex retromer complex endomembrane system intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole protein-containing complex cellular anatomical structure membrane membrane protein complex retromer complex endomembrane system intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton cell periphery cell cortex cytoplasm membrane-bounded organelle organelle envelope nuclear envelope nucleus intracellular membrane-bounded organelle centrosome microtubule organizing center polymeric cytoskeletal fiber microtubule end supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule plus-end centriole cytosol cell projection cilium intracellular protein-containing complex centriolar subdistal appendage plasma membrane bounded cell projection cell leading edge intercellular bridge chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region condensed chromosome endosome membrane endosome intracellular vesicle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle vesicle organelle membrane somatodendritic compartment cell body neuronal cell body axon neuron projection microtubule associated complex catalytic complex dynein complex ciliary basal body
A, B, C, D, E A, B, C, D, E, F, G, I	Alpha-centractin	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	-	intracellular organelle microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
T [auth V]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
T [auth V]	IPR047125	Dynactin subunit 5	Family
S [auth U]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
S [auth U]	IPR027777	Dynactin subunit 6	Family
O, R	IPR009991	Dynactin subunit 3	Family
M, N, P, Q	IPR028133	Dynamitin	Family
L	IPR019771	F-actin capping protein, beta subunit, conserved site	Conserved Site
L	IPR001698	F-actin-capping protein subunit beta	Family
L	IPR043175	F-actin-capping protein subunit beta, N-terminal domain	Homologous Superfamily
L	IPR037282	F-actin-capping protein subunit alpha/beta	Homologous Superfamily
L	IPR042276	F-actin-capping protein subunit alpha/beta, domain 2	Homologous Superfamily
K	IPR002189	F-actin-capping protein subunit alpha	Family
K	IPR042489	F-actin capping protein, alpha subunit, domain 1	Homologous Superfamily
K	IPR037282	F-actin-capping protein subunit alpha/beta	Homologous Superfamily
K	IPR017865	F-actin capping protein, alpha subunit, conserved site	Conserved Site
K	IPR042276	F-actin-capping protein subunit alpha/beta, domain 2	Homologous Superfamily
J	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
J	IPR004000	Actin family	Family
H	IPR020902	Actin/actin-like conserved site	Conserved Site
H	IPR004001	Actin, conserved site	Conserved Site
H	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
H	IPR004000	Actin family	Family
DA [auth j], IA [auth q]	IPR022780	Dynein family light intermediate chain	Family
DA [auth j], IA [auth q]	IPR008467	Dynein 1 light intermediate chain	Family
DA [auth j], IA [auth q]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
BA [auth g], CA [auth h], GA [auth o], HA [auth p]	IPR025956	Cytoplasmic dynein 1 intermediate chain 1/2	Family
BA [auth g], CA [auth h], GA [auth o], HA [auth p]	IPR001680	WD40 repeat	Repeat
BA [auth g], CA [auth h], GA [auth o], HA [auth p]	IPR050687	Dynein axonemal intermediate chain 1/2/3/4	Family
BA [auth g], CA [auth h], GA [auth o], HA [auth p]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
BA [auth g], CA [auth h], GA [auth o], HA [auth p]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR026983	Dynein heavy chain	Family
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR013602	Dynein heavy chain, linker	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR042219	Dynein heavy chain, AAA lid domain superfamily	Homologous Superfamily
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR035706	Dynein heavy chain, ATP-binding dynein motor region	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR041228	Dynein heavy chain, C-terminal domain	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR054354	Dynein 2 heavy chain 1, cytoplasmic, ATPase lid domain	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR003593	AAA+ ATPase domain	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR041658	Dynein heavy chain, AAA lid domain	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR041466	Dynein heavy chain, AAA 5 extension domain	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR042228	Dynein heavy chain, linker, subdomain 3	Homologous Superfamily
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR035699	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR024743	Dynein heavy chain, coiled coil stalk	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR013594	Dynein heavy chain, tail	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR043157	Dynein heavy chain, AAA1 domain, small subdomain	Homologous Superfamily
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR004273	Dynein heavy chain, D6 P-loop domain	Domain
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR042222	Dynein heavy chain, domain 2, N-terminal	Homologous Superfamily
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR043160	Dynein heavy chain, C-terminal domain, barrel region	Homologous Superfamily
AA [auth f], EA [auth m], FA [auth n], Z [auth e]	IPR024317	Dynein heavy chain, AAA module D4	Domain
X [auth c], Y [auth d]	IPR051149	Spindly/BICDR Dynein Motor Adapter	Family
V [auth Y]	IPR008603	Dynactin subunit 4	Family
U [auth W], W [auth Z]	IPR000938	CAP Gly-rich domain	Domain
U [auth W], W [auth Z]	IPR036859	CAP Gly-rich domain superfamily	Homologous Superfamily
U [auth W], W [auth Z]	IPR022157	Dynein associated protein	Domain
U [auth W], W [auth Z]	IPR059265	Dynactin subunit 1, DUF8221	Domain
A, B, C, D, E A, B, C, D, E, F, G, I	IPR020902	Actin/actin-like conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, I	IPR004001	Actin, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, I	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, I	IPR004000	Actin family	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.