9DAE | pdb_00009dae

Cryo-EM Structure of the Multimeric Phosphoenolpyruvate Binding Domain of Staphylothermus marinus Phosphoenolpyruvate Synthase

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X [auth VA]	PCI	e9daeVA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
W [auth TA]	PCI	e9daeTA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
V [auth RA]	PCI	e9daeRA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
U [auth PA]	PCI	e9daePA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
T [auth NA]	PCI	e9daeNA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
S [auth LA]	PCI	e9daeLA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
R [auth JA]	PCI	e9daeJA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
Q [auth HA]	PCI	e9daeHA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
P [auth FA]	PCI	e9daeFA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
O [auth DA]	PCI	e9daeDA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
N [auth BA]	PCI	e9daeBA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
M [auth Z]	PCI	e9daeZ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
L [auth X]	PCI	e9daeX1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
K [auth V]	PCI	e9daeV1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
J [auth S]	PCI	e9daeS1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
I [auth Q]	PCI	e9daeQ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
H [auth O]	PCI	e9daeO1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
G [auth M]	PCI	e9daeM1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
F [auth K]	PCI	e9daeK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
E [auth I]	PCI	e9daeI1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
D [auth G]	PCI	e9daeG1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
C [auth E]	PCI	e9daeE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
B [auth C]	PCI	e9daeC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PCI	ECOD (v295.2)
A	Gasdermin_C	e9daeA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Gasdermin_C	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	Phosphoenolpyruvate synthase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyruvate, water dikinase activity phosphotransferase activity, paired acceptors kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	monosaccharide metabolic process carbohydrate metabolic process small molecule biosynthetic process carbohydrate biosynthetic process hexose metabolic process primary metabolic process monosaccharide biosynthetic process gluconeogenesis hexose biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process glucose metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily	Homologous Superfamily
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR008279	PEP-utilising enzyme, mobile domain	Domain
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR018274	PEP-utilising enzyme, active site	Active Site
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR006319	Phosphoenolpyruvate synthase	Family
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR013815	ATP-grasp fold, subdomain 1	Homologous Superfamily
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR023151	PEP-utilising enzyme, conserved site	Conserved Site
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR036637	Phosphohistidine domain superfamily	Homologous Superfamily
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR002192	Pyruvate phosphate dikinase, AMP/ATP-binding	Domain
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR040442	Pyruvate kinase-like domain superfamily	Homologous Superfamily
A, B [auth C], C [auth E], D [auth G], E [auth I], A, B [auth C], C [auth E], D [auth G], E [auth I], F [auth K], G [auth M], H [auth O], I [auth Q], J [auth S], K [auth V], L [auth X], M [auth Z], N [auth BA], O [auth DA], P [auth FA], Q [auth HA], R [auth JA], S [auth LA], T [auth NA], U [auth PA], V [auth RA], W [auth TA], X [auth VA]	IPR000121	PEP-utilising enzyme, C-terminal	Domain