9CL9 | pdb_00009cl9

WT 12C IM fraction, B-b3 with RluB bound

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
K [auth U]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8096358	3000334	SCOP2B (2022-06-29)
I [auth J]	SCOP2B Superfamily	Ribosomal protein L13	8096350	3001134	SCOP2B (2022-06-29)
C [auth T]	SCOP2B Superfamily	Ribosomal proteins S24e, L23 and L15e	8035415	3000210	SCOP2B (2022-06-29)
B [auth R]	SCOP2B Superfamily	l21p-like	8096354	3002005	SCOP2B (2022-06-29)
L [auth Y]	SCOP2B Superfamily	Ribosomal protein L29 (L29p)	8096370	3000713	SCOP2B (2022-06-29)
J [auth S]	SCOP2B Superfamily	Ribosomal protein L22	8096336	3001078	SCOP2B (2022-06-29)
A [auth Q]	SCOP2B Superfamily	Ribosomal protein L20	8096382	3000563	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G [auth D]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
H [auth E]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
K [auth U]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
K [auth U]	PF00467	KOW motif (KOW)	KOW motif	-	Family
I [auth J]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
E [auth A]	PF00849	RNA pseudouridylate synthase (PseudoU_synth_2)	RNA pseudouridylate synthase	-	Family
E [auth A]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
D [auth 2]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
C [auth T]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
B [auth R]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
L [auth Y]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
J [auth S]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
A [auth Q]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth D]	Large ribosomal subunit protein uL3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
H [auth E]	Large ribosomal subunit protein uL4	enzyme regulator activity molecular function inhibitor activity molecular function regulator activity nuclease inhibitor activity enzyme inhibitor activity endoribonuclease inhibitor activity ribonuclease inhibitor activity DNA binding binding nucleic acid binding transcription regulator activity RNA-binding transcription regulator activity RNA binding rRNA binding enzyme regulator activity molecular function inhibitor activity molecular function regulator activity nuclease inhibitor activity enzyme inhibitor activity endoribonuclease inhibitor activity ribonuclease inhibitor activity DNA binding binding nucleic acid binding transcription regulator activity RNA-binding transcription regulator activity RNA binding rRNA binding mRNA 5'-UTR binding mRNA binding translation regulator activity translation repressor activity structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process protein biosynthetic process post-transcriptional regulation of gene expression negative regulation of translation protein metabolic process negative regulation of protein metabolic process regulation of protein metabolic process translation negative regulation of gene expression negative regulation of cytoplasmic translation regulation of translation cytoplasmic translation regulation of cytoplasmic translation response to stimulus response to chemical response to antibiotic DNA-templated transcription termination protein-containing complex disassembly positive regulation of macromolecule biosynthetic process regulation of protein-containing complex disassembly positive regulation of metabolic process positive regulation of macromolecule metabolic process cellular component disassembly positive regulation of RNA metabolic process regulation of termination of DNA-templated transcription positive regulation of cellular component organization regulation of cellular component organization positive regulation of DNA-templated transcription positive regulation of biological process transcriptional attenuation positive regulation of termination of DNA-templated transcription cellular component organization positive regulation of biosynthetic process cellular component organization or biogenesis positive regulation of protein-containing complex disassembly positive regulation of cellular process protein-containing complex organization positive regulation of RNA biosynthetic process ribonucleoprotein complex biogenesis organelle assembly membraneless organelle assembly cellular component biogenesis ribosome biogenesis organelle organization cellular component assembly ribosome assembly	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit cytoplasm cytosol cytosolic large ribosomal subunit protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit cytoplasm cytosol cytosolic large ribosomal subunit cytosolic ribosome
K [auth U]	Large ribosomal subunit protein uL24	RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
I [auth J]	Large ribosomal subunit protein uL13	RNA binding binding nucleic acid binding mRNA binding rRNA binding large ribosomal subunit rRNA binding mRNA 5'-UTR binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding structural molecule activity RNA binding binding nucleic acid binding mRNA binding rRNA binding large ribosomal subunit rRNA binding mRNA 5'-UTR binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process cytoplasmic translation	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
F [auth CA]	23S rRNA	-	-	-
E [auth A]	Ribosomal large subunit pseudouridine synthase B	isomerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid pseudouridine synthase activity rRNA pseudouridine synthase activity 23S rRNA pseudouridine(2605) synthase activity catalytic activity intramolecular transferase activity RNA binding binding nucleic acid binding	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing enzyme-directed rRNA pseudouridine synthesis rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing enzyme-directed rRNA pseudouridine synthesis rRNA modification nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process pseudouridine synthesis rRNA pseudouridine synthesis primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA modification biosynthetic process macromolecule modification metabolic process cellular process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
D [auth 2]	Large ribosomal subunit protein bL34	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth T]	Large ribosomal subunit protein uL23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
B [auth R]	Large ribosomal subunit protein bL21	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
L [auth Y]	Large ribosomal subunit protein uL29	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth S]	Large ribosomal subunit protein uL22	RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly assembly of large subunit precursor of preribosome protein-containing complex assembly ribosomal large subunit assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly assembly of large subunit precursor of preribosome protein-containing complex assembly ribosomal large subunit assembly cellular process cellular component organization or biogenesis ribosome assembly primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process protein metabolic process macromolecule metabolic process response to stimulus response to chemical response to antibiotic cytosolic ribosome assembly	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit cytoplasm cytosol cytosolic large ribosomal subunit protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit cytoplasm cytosol cytosolic large ribosomal subunit cytosolic ribosome
A [auth Q]	Large ribosomal subunit protein bL20	RNA binding binding nucleic acid binding mRNA binding translation regulator activity mRNA regulatory element binding translation repressor activity translation repressor activity structural molecule activity structural constituent of ribosome rRNA binding large ribosomal subunit rRNA binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G [auth D]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
G [auth D]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
G [auth D]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
G [auth D]	IPR000597	Large ribosomal subunit protein uL3	Family
H [auth E]	IPR013005	Large ribosomal subunit protein uL4-like	Family
H [auth E]	IPR002136	Large ribosomal subunit protein uL4	Family
H [auth E]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
K [auth U]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
K [auth U]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
K [auth U]	IPR003256	Large ribosomal subunit protein uL24	Family
K [auth U]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
K [auth U]	IPR005824	KOW	Domain
K [auth U]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
I [auth J]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
I [auth J]	IPR005822	Large ribosomal subunit protein uL13	Family
I [auth J]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
I [auth J]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
E [auth A]	IPR020103	Pseudouridine synthase, catalytic domain superfamily	Homologous Superfamily
E [auth A]	IPR002942	RNA-binding S4 domain	Domain
E [auth A]	IPR050343	Ribosomal RNA Pseudouridine Synthase RsuA	Family
E [auth A]	IPR000748	Pseudouridine synthase, RsuA/RluB/E/F	Family
E [auth A]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
E [auth A]	IPR006145	Pseudouridine synthase, RsuA/RluA-like	Domain
E [auth A]	IPR018496	Pseudouridine synthase, RsuA/RluB/E/F, conserved site	Conserved Site
D [auth 2]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
D [auth 2]	IPR000271	Large ribosomal subunit protein bL34	Family
C [auth T]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
C [auth T]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
C [auth T]	IPR001014	Large ribosomal subunit protein uL23, conserved site	Conserved Site
C [auth T]	IPR013025	Large ribosomal subunit protein uL23-like	Family
B [auth R]	IPR028909	Large ribosomal subunit protein bL21-like	Family
B [auth R]	IPR001787	Large ribosomal subunit protein bL21	Family
B [auth R]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
B [auth R]	IPR018258	Large ribosomal subunit protein bL21, conserved site	Conserved Site
L [auth Y]	IPR050063	Universal ribosomal protein uL29	Family
L [auth Y]	IPR001854	Large ribosomal subunit protein uL29	Family
L [auth Y]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
L [auth Y]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
J [auth S]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
J [auth S]	IPR001063	Large ribosomal subunit protein uL22	Family
J [auth S]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
J [auth S]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
J [auth S]	IPR005727	Large ribosomal subunit protein uL22, bacterial/chloroplast-type	Family
A [auth Q]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
A [auth Q]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
A [auth Q]	IPR005813	Large ribosomal subunit protein bL20	Family