9CCG | pdb_00009ccg

Fusobacterium nucleatum BamA-Fab 9 complex


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C, E
Light ChainIGKV1 Kappapotra domain-containing proteinSAbDab (2025-12-19)
B, F
Heavy ChainIGHV3 -potra domain-containing proteinSAbDab (2025-12-19)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D
PF07244Surface antigen variable number repeat (POTRA)Surface antigen variable number repeatThis family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members ...This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure.
Domain
A, D
PF01103Omp85 superfamily domain (Omp85)Omp85 superfamily domainThe Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA fro ...The Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA from E. coli.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, E
Fab 9 light chain---
B, F
Fab 9 heavy chain---
A, D
POTRA domain-containing protein- -