9C59 | pdb_00009c59

Human AP-3 dimer bound to myristoylated Arf1 (Q71L) and LAMP1 cargo on a lipid nanodisc

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth c]SCOP2B SuperfamilyRas-like P-loop GTPases 8089848 3002022 SCOP2B (2022-06-29)
L [auth a]SCOP2B SuperfamilyRas-like P-loop GTPases 8089848 3002022 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyRas-like P-loop GTPases 8089848 3002022 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyRas-like P-loop GTPases 8089848 3002022 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth D],
H [auth d]		PF01602Adaptin N terminal region (Adaptin_N)Adaptin N terminal region- Repeat
E [auth A],
F [auth C],
L [auth a],
M [auth c]		PF00025ADP-ribosylation factor family (Arf)ADP-ribosylation factor familyPfam combines a number of different Prosite families together Domain
D [auth S],
K [auth s]		PF01217Clathrin adaptor complex small chain (Clat_adaptor_s)Clathrin adaptor complex small chainDomain
C [auth M],
J [auth m]		PF01217Clathrin adaptor complex small chain (Clat_adaptor_s)Clathrin adaptor complex small chainDomain
C [auth M],
J [auth m]		PF00928Adaptor complexes medium subunit family (Adap_comp_sub)Adaptor complexes medium subunit family- Family
B,
I [auth b]		PF01602Adaptin N terminal region (Adaptin_N)Adaptin N terminal region- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth D],
H [auth d]		AP-3 complex subunit delta-1-
G [auth Y],
N [auth y]		Lysosome-associated membrane glycoprotein 1
E [auth A],
F [auth C],
L [auth a],
M [auth c]		ADP-ribosylation factor 1
D [auth S],
K [auth s]		AP-3 complex subunit sigma-1-
C [auth M],
J [auth m]		AP-3 complex subunit mu-1
B,
I [auth b]		AP-3 complex subunit beta-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth D],
H [auth d]		IPR017105Adaptor protein complex AP-3, delta subunitFamily
A [auth D],
H [auth d]		IPR010474AP-3 complex subunit delta domain, metazoaDomain
A [auth D],
H [auth d]		IPR016024Armadillo-type foldHomologous Superfamily
A [auth D],
H [auth d]		IPR011989Armadillo-like helicalHomologous Superfamily
A [auth D],
H [auth d]		IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalDomain
G [auth Y],
N [auth y]		IPR048524Lysosome-associated membrane glycoprotein 2-like, transmembrane domainDomain
G [auth Y],
N [auth y]		IPR002000Lysosome-associated membrane glycoproteinFamily
G [auth Y],
N [auth y]		IPR048528Lysosome-associated membrane glycoprotein 2-like, luminal domainsDomain
G [auth Y],
N [auth y]		IPR018134Lysosome-associated membrane glycoprotein, conserved siteConserved Site
E [auth A],
F [auth C],
L [auth a],
M [auth c]		IPR045872ADP-ribosylation factor 1-5Family
E [auth A],
F [auth C],
L [auth a],
M [auth c]		IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth A],
F [auth C],
L [auth a],
M [auth c]		IPR005225Small GTP-binding domainDomain
E [auth A],
F [auth C],
L [auth a],
M [auth c]		IPR024156Small GTPase superfamily, ARF typeFamily
E [auth A],
F [auth C],
L [auth a],
M [auth c]		IPR006689Small GTPase superfamily, ARF/SAR typeFamily
D [auth S],
K [auth s]		IPR027155AP-3 complex subunit sigmaFamily
D [auth S],
K [auth s]		IPR000804Clathrin adaptor complex, small chainConserved Site
D [auth S],
K [auth s]		IPR016635Adaptor protein complex, sigma subunitFamily
D [auth S],
K [auth s]		IPR011012Longin-like domain superfamilyHomologous Superfamily
D [auth S],
K [auth s]		IPR022775AP complex, mu/sigma subunitDomain
C [auth M],
J [auth m]		IPR050431Adaptor complexes medium subunitFamily
C [auth M],
J [auth m]		IPR036168AP-2 complex subunit mu, C-terminal superfamilyHomologous Superfamily
C [auth M],
J [auth m]		IPR028565Mu homology domainDomain
C [auth M],
J [auth m]		IPR018240Clathrin adaptor, mu subunit, conserved siteConserved Site
C [auth M],
J [auth m]		IPR001392Clathrin adaptor, mu subunitFamily
C [auth M],
J [auth m]		IPR011012Longin-like domain superfamilyHomologous Superfamily
C [auth M],
J [auth m]		IPR022775AP complex, mu/sigma subunitDomain
B,
I [auth b]		IPR016024Armadillo-type foldHomologous Superfamily
B,
I [auth b]		IPR026739AP complex subunit betaFamily
B,
I [auth b]		IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalDomain
B,
I [auth b]		IPR026740AP-3 complex subunit betaFamily
B,
I [auth b]		IPR029394AP-3 complex subunit beta 1, serine-rich domainDomain
B,
I [auth b]		IPR029390AP-3 complex subunit beta, C-terminal domainDomain
B,
I [auth b]		IPR011989Armadillo-like helicalHomologous Superfamily
B,
I [auth b]		IPR056314AP-3 complex subunit beta-1/2, C-terminal domainDomain
B,
I [auth b]		IPR015151Beta-adaptin appendage, C-terminal subdomainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth D],
H [auth d]		Pharos:  O14617
G [auth Y],
N [auth y]		Pharos:  P11279
E [auth A],
F [auth C],
L [auth a],
M [auth c]		Pharos:  P84077
D [auth S],
K [auth s]		Pharos:  Q92572
C [auth M],
J [auth m]		Pharos:  Q9Y2T2
B,
I [auth b]		Pharos:  O00203