| U [auth b] | IPR008688 | ATP synthase, F0 complex, subunit B/MI25 | Family |
| U [auth b] | IPR013837 | ATP synthase, F0 complex, subunit B | Family |
| R [auth S] | IPR020781 | ATPase, OSCP/delta subunit, conserved site | Conserved Site |
| R [auth S] | IPR000711 | ATPase, OSCP/delta subunit | Family |
| R [auth S] | IPR026015 | F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily | Homologous Superfamily |
| IPR035921 | F/V-ATP synthase subunit C superfamily | Homologous Superfamily |
| IPR038662 | F1F0 ATP synthase subunit C superfamily | Homologous Superfamily |
| IPR020537 | ATP synthase, F0 complex, subunit C, DCCD-binding site | Binding Site |
| IPR000454 | ATP synthase, F0 complex, subunit C | Family |
| IPR002379 | V-ATPase proteolipid subunit C-like domain | Domain |
| I [auth J] | IPR007648 | Mitochondrial ATPase inhibitor | Family |
| H [auth I] | IPR036742 | ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial | Homologous Superfamily |
| H [auth I] | IPR006721 | ATP synthase, F1 complex, epsilon subunit, mitochondrial | Family |
| G [auth H] | IPR036771 | F0F1 ATP synthase delta/epsilon subunit, N-terminal | Homologous Superfamily |
| G [auth H] | IPR036794 | ATP synthase delta/epsilon subunit, C-terminal domain superfamily | Homologous Superfamily |
| G [auth H] | IPR020546 | ATP synthase, F1 complex, delta/epsilon subunit, N-terminal | Domain |
| G [auth H] | IPR048937 | F1F0-ATP synthase delta subunit, C-terminal domain, metazoan | Domain |
| G [auth H] | IPR001469 | ATP synthase, F1 complex, delta/epsilon subunit | Family |
| F [auth G] | IPR023632 | ATP synthase, F1 complex, gamma subunit conserved site | Conserved Site |
| F [auth G] | IPR000131 | ATP synthase, F1 complex, gamma subunit | Family |
| F [auth G] | IPR035968 | ATP synthase, F1 complex, gamma subunit superfamily | Homologous Superfamily |
C [auth D], D [auth E], E [auth F] | IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | Domain |
C [auth D], D [auth E], E [auth F] | IPR024034 | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal | Homologous Superfamily |
C [auth D], D [auth E], E [auth F] | IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | Homologous Superfamily |
C [auth D], D [auth E], E [auth F] | IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | Active Site |
C [auth D], D [auth E], E [auth F] | IPR050053 | ATPase alpha/beta chains | Family |
C [auth D], D [auth E], E [auth F] | IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Domain |
C [auth D], D [auth E], E [auth F] | IPR055190 | ATP synthase A/B type, C-terminal domain | Domain |
C [auth D], D [auth E], E [auth F] | IPR003593 | AAA+ ATPase domain | Domain |
C [auth D], D [auth E], E [auth F] | IPR005722 | ATP synthase, F1 complex, beta subunit | Family |
C [auth D], D [auth E], E [auth F] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
AA [auth C], B [auth A], CA [auth B] | IPR038376 | ATP synthase, alpha subunit, C-terminal domain superfamily | Homologous Superfamily |
AA [auth C], B [auth A], CA [auth B] | IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | Domain |
AA [auth C], B [auth A], CA [auth B] | IPR033732 | ATP synthase, F1 complex, alpha subunit nucleotide-binding domain | Domain |
AA [auth C], B [auth A], CA [auth B] | IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | Homologous Superfamily |
AA [auth C], B [auth A], CA [auth B] | IPR023366 | ATP synthase subunit alpha, N-terminal domain-like superfamily | Homologous Superfamily |
AA [auth C], B [auth A], CA [auth B] | IPR000793 | ATP synthase, alpha subunit, C-terminal | Domain |
AA [auth C], B [auth A], CA [auth B] | IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | Active Site |
AA [auth C], B [auth A], CA [auth B] | IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Domain |
AA [auth C], B [auth A], CA [auth B] | IPR005294 | ATP synthase, F1 complex, alpha subunit | Family |
AA [auth C], B [auth A], CA [auth B] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| BA [auth f] | IPR019344 | Mitochondrial F1-F0 ATP synthase subunit F, predicted | Family |
| Y [auth i] | IPR009125 | ATP synthase membrane subunit K | Family |
| X [auth e] | IPR008386 | ATP synthase, F0 complex, subunit E, mitochondrial | Family |
| W [auth d] | IPR036228 | ATP synthase, F0 complex, subunit D superfamily, mitochondrial | Homologous Superfamily |
| W [auth d] | IPR008689 | ATP synthase, F0 complex, subunit D, mitochondrial | Family |
| V [auth c] | IPR036204 | ATP synthase-coupling factor 6 superfamily, mitochondrial | Homologous Superfamily |
| V [auth c] | IPR008387 | ATP synthase-coupling factor 6, mitochondrial | Family |
| T [auth a] | IPR023011 | ATP synthase, F0 complex, subunit A, active site | Active Site |
| T [auth a] | IPR000568 | ATP synthase, F0 complex, subunit A | Family |
| T [auth a] | IPR035908 | ATP synthase, F0 complex, subunit A superfamily | Homologous Superfamily |
| T [auth a] | IPR045083 | ATP synthase, F0 complex, subunit A, bacterial/mitochondria | Family |
| S [auth T] | IPR016702 | ATP synthase, F0 complex, gamma subunit, metazoa | Family |
| S [auth T] | IPR006808 | ATP synthase F0 complex subunit G, mitochondrial | Family |
| A [auth 8] | IPR039017 | ATP synthase protein 8, mammals | Family |
| A [auth 8] | IPR001421 | ATP synthase protein 8, metazoa | Family |