9BT8 | pdb_00009bt8

Structure of Src in complex with beta-arrestin 1 revealing SH3 binding sites


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth C]SCOP2B SuperfamilySH3-domain 8041599 3000153 SCOP2B (2022-06-29)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
F [auth L]Light ChainIGKV1 Kappabeta-arrestin-1 | vasopressin v2 receptorSAbDab (2025-12-19)
D [auth A]Heavy ChainIGHV1 -beta-arrestin-1SAbDab (2025-12-19)
B [auth H]Heavy ChainIGHV3 -beta-arrestin-1 | vasopressin v2 receptorSAbDab (2025-12-19)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth B]PF00339Arrestin (or S-antigen), N-terminal domain (Arrestin_N)Arrestin (or S-antigen), N-terminal domainIg-like beta-sandwich fold. Scop reports duplication with C-terminal domain. Domain
E [auth B]PF02752Arrestin (or S-antigen), C-terminal domain (Arrestin_C)Arrestin (or S-antigen), C-terminal domainIg-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Domain
A [auth C]PF00018SH3 domain (SH3_1)SH3 domainSH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth L]Antibody fragment Fab30, light chain---
E [auth B]Beta-arrestin-1
D [auth A]Nanobody 32---
C [auth V]Vasopressin V2 receptor
B [auth H]Antibody fragment Fab30, heavy chain---
A [auth C]Proto-oncogene tyrosine-protein kinase Src

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C [auth V]SEP Parent Component: SER

RESIDAA0037

PSI-MOD :  O-phospho-L-serine MOD:00046
C [auth V]TPO Parent Component: THR

RESIDAA0037 , AA0038

PSI-MOD :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047