Room-temperature X-ray structure of Thermus Thermophilus serine hydroxymethyltransferase (SHMT) with PLP-glycine external aldimine and 5-formyltetrahydrofolate (folinic acid)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | WD40 | e9bohB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| A | Fer4_20 | e9bohA01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Fer4_20 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00464 | Serine hydroxymethyltransferase (SHMT) | Serine hydroxymethyltransferase | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Serine hydroxymethyltransferase |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR015424 | Pyridoxal phosphate-dependent transferase | Homologous Superfamily | |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | Homologous Superfamily | |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | Homologous Superfamily | |
| IPR039429 | Serine hydroxymethyltransferase-like domain | Domain | |
| IPR001085 | Serine hydroxymethyltransferase | Family | |
| IPR049943 | Serine hydroxymethyltransferase-like | Family | |
| IPR019798 | Serine hydroxymethyltransferase, pyridoxal phosphate binding site | Binding Site |














