Annotations: 9B83

Cryo-EM structure of human ADAR1 in complex with dsRNA derived from human GLI1 gene

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	Reovirus_L2_GTase	e9b83B1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
B [auth A]	ecTbetaR2	e9b83A03	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ecTbetaR2	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A], C [auth B]	PF02137	Adenosine-deaminase (editase) domain (A_deamin)	Adenosine-deaminase (editase) domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth A], C [auth B]	Maltodextrin-binding protein,Double-stranded RNA-specific adenosine deaminase	RNA binding double-stranded RNA binding binding nucleic acid binding DNA binding double-stranded RNA adenosine deaminase activity hydrolase activity deaminase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines adenosine deaminase activity tRNA-specific adenosine deaminase activity catalytic activity, acting on RNA RNA binding double-stranded RNA binding binding nucleic acid binding DNA binding double-stranded RNA adenosine deaminase activity hydrolase activity deaminase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines adenosine deaminase activity tRNA-specific adenosine deaminase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid catalytic activity, acting on a tRNA cation binding ion binding metal ion binding small molecule binding	RNA metabolic process primary metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA modification adenosine to inosine editing base conversion or substitution editing macromolecule modification metabolic process cellular process macromolecule metabolic process regulation of cellular process regulation of protein modification process regulation of catalytic activity RNA metabolic process primary metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA modification adenosine to inosine editing base conversion or substitution editing macromolecule modification metabolic process cellular process macromolecule metabolic process regulation of cellular process regulation of protein modification process regulation of catalytic activity regulation of protein phosphorylation negative regulation of biological process negative regulation of phosphate metabolic process negative regulation of catalytic activity regulation of transferase activity regulation of primary metabolic process negative regulation of kinase activity phosphate-containing compound metabolic process negative regulation of protein modification process negative regulation of cellular process protein metabolic process protein modification process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biological process protein phosphorylation phosphorylation negative regulation of protein kinase activity by regulation of protein phosphorylation regulation of protein metabolic process negative regulation of metabolic process biological regulation negative regulation of molecular function negative regulation of protein kinase activity regulation of protein kinase activity regulation of macromolecule metabolic process regulation of molecular function regulation of kinase activity negative regulation of protein phosphorylation regulation of phosphorylation negative regulation of phosphorylation regulation of metabolic process cellular localization establishment of protein localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein export from nucleus establishment of localization localization intercellular transport protein transport establishment of localization in cell macromolecule localization intracellular protein localization nuclear export intracellular protein transport mRNA modification mRNA metabolic process pre-miRNA processing RNA biosynthetic process nucleic acid biosynthetic process RNA processing regulation of biosynthetic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process regulatory ncRNA processing regulatory ncRNA-mediated gene silencing regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process miRNA processing regulation of macromolecule biosynthetic process biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus protein localization to nucleus import into nucleus establishment of protein localization to organelle protein localization to organelle protein import into nucleus mRNA processing ribonucleoprotein complex biogenesis RISC complex assembly protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis protein-containing complex organization positive regulation of viral genome replication positive regulation of viral process positive regulation of biological process viral life cycle regulation of viral life cycle regulation of viral process viral genome replication viral process regulation of viral genome replication response to virus response to peptide response to interferon-alpha response to chemical response to cytokine defense response to virus cellular response to virus	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membraneless organelle nuclear lumen membrane cytosol protein-containing complex nuclear protein-containing complex supraspliceosomal complex spliceosomal complex ribonucleoprotein complex nucleoplasm
A [auth C]	RNA (31-MER)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A], C [auth B]	IPR044456	ADAR1, first double-stranded RNA binding domain	Domain
B [auth A], C [auth B]	IPR002466	Adenosine deaminase/editase	Domain
B [auth A], C [auth B]	IPR042371	Z-binding domain	Domain
B [auth A], C [auth B]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
B [auth A], C [auth B]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
B [auth A], C [auth B]	IPR044457	ADAR1, third double-stranded RNA binding domain	Domain
B [auth A], C [auth B]	IPR014720	Double-stranded RNA-binding domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9B83 | pdb_00009b83

Cryo-EM structure of human ADAR1 in complex with dsRNA derived from human GLI1 gene

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage