9B7S | pdb_00009b7s

Fab3-2 in complex with the capsid of Adeno-associated virus type 9


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AecTbetaR2e9b7sA01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: ecTbetaR2ECOD (v294.2)
H [auth L]ecTbetaR2e9b7sL01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: ecTbetaR2ECOD (v294.2)
G [auth H]ecTbetaR2e9b7sH01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: ecTbetaR2ECOD (v294.2)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
H [auth L]Light ChainIGKV3 Kappacapsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-05-08)
G [auth H]Heavy ChainIGHV3 -capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-05-08)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Capsid protein VP1 -
H [auth L]Fab3-2 light chain---
G [auth H]Fab3-2 heavy chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR013607Phospholipase A2-like domainDomain
A, B, C, D, E
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
A, B, C, D, E
IPR001403Coat protein VP1/VP2, ParvovirusDomain
A, B, C, D, E
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily