9B7Q | pdb_00009b7q

Fab2-7 in complex with the capsid of Adeno-associated virus type 9

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Reovirus_L2_GTase	e9b7qA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
M [auth C]	Reovirus_L2_GTase	e9b7qC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
N [auth D]	Reovirus_L2_GTase	e9b7qD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
O [auth E]	Reovirus_L2_GTase	e9b7qE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
L [auth B]	Reovirus_L2_GTase	e9b7qB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
B [auth H]	ecTbetaR2	e9b7qH01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ecTbetaR2	ECOD (v295)
D [auth h]	Reovirus_L2_GTase	e9b7qh1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
F [auth 1]	Reovirus_L2_GTase	e9b7q11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
H [auth 3]	Reovirus_L2_GTase	e9b7q31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
J [auth 5]	Reovirus_L2_GTase	e9b7q51	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
C [auth L]	ecTbetaR2	e9b7qL01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ecTbetaR2	ECOD (v295)
E [auth l]	Reovirus_L2_GTase	e9b7ql1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
I [auth 4]	Reovirus_L2_GTase	e9b7q41	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
K [auth 6]	Reovirus_L2_GTase	e9b7q61	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)
G [auth 2]	Reovirus_L2_GTase	e9b7q21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Reovirus_L2_GTase	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, L [auth B], M [auth C], N [auth D], O [auth E]	Capsid protein VP1	structural molecule activity cation binding ion binding binding metal ion binding small molecule binding	-	viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid
B [auth H], D [auth h], F [auth 1], H [auth 3], J [auth 5]	Fab2-7 heavy chain	-	-	-
C [auth L], E [auth l], G [auth 2], I [auth 4], K [auth 6]	Fab2-7 light chain	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, L [auth B], M [auth C], N [auth D], O [auth E]	IPR013607	Phospholipase A2-like domain	Domain
A, L [auth B], M [auth C], N [auth D], O [auth E]	IPR016184	Capsid/spike protein, ssDNA virus	Homologous Superfamily
A, L [auth B], M [auth C], N [auth D], O [auth E]	IPR001403	Coat protein VP1/VP2, Parvovirus	Domain
A, L [auth B], M [auth C], N [auth D], O [auth E]	IPR036952	Parvovirus coat protein VP1/VP2	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.