9B7P | pdb_00009b7p

Fab2-6 in complex with the capsid of Adeno-associated virus type 9


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth L]ecTbetaR2e9b7pL01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: ecTbetaR2ECOD (v294.2)
HecTbetaR2e9b7pH01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: ecTbetaR2ECOD (v294.2)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
G [auth L]Light ChainIGKV3 Kappacapsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-05-08)
Heavy ChainIGHV3 -capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-05-08)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Capsid protein VP1 -
G [auth L]Fab2-6 light chain---
Fab2-6 heavy chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR013607Phospholipase A2-like domainDomain
A, B, C, D, E
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
A, B, C, D, E
IPR001403Coat protein VP1/VP2, ParvovirusDomain
A, B, C, D, E
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily