9B6T | pdb_00009b6t

Fab1-7 in complex with the capsid of Adeno-associated virus type 9


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AReovirus_L2_GTasee9b6tA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
BReovirus_L2_GTasee9b6tB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
CReovirus_L2_GTasee9b6tC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
DReovirus_L2_GTasee9b6tD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
EReovirus_L2_GTasee9b6tE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
FReovirus_L2_GTasee9b6tF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Reovirus_L2_GTaseECOD (v295)
G [auth H]ecTbetaR2e9b6tH01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: ecTbetaR2ECOD (v295)
H [auth L]ecTbetaR2e9b6tL01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: ecTbetaR2ECOD (v295)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
G [auth H]Heavy ChainIGHV4 -capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-06-26)
H [auth L]Light ChainIGLV1 Lambdacapsid protein vp1 | capsid protein vp1 | capsid protein vp1 | capsid protein vp1SAbDab (2026-06-26)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Capsid protein VP1 -
G [auth H]Fab1-7 heavy chain---
H [auth L]Fab1-7 light chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR013607Phospholipase A2-like domainDomain
A, B, C, D, E
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
A, B, C, D, E
IPR001403Coat protein VP1/VP2, ParvovirusDomain
A, B, C, D, E
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily