9B60 | pdb_00009b60

GluA2 flip Q in complex with TARPgamma2 at pH8, consensus structure of TMD-TARPgamma2

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth D]WD40e9b60D1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
E [auth A]WD40e9b60A1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
D [auth B]WD40e9b60B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
CWD40e9b60C1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
H [auth G]WD40e9b60G1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
G [auth E]WD40e9b60E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
B [auth F]WD40e9b60F1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
A [auth H]WD40e9b60H1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C,
D [auth B],
E [auth A],
F [auth D]		PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
A [auth H],
B [auth F],
G [auth E],
H [auth G]		PF00822PMP-22/EMP/MP20/Claudin family (PMP22_Claudin)PMP-22/EMP/MP20/Claudin family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C,
D [auth B],
E [auth A],
F [auth D]		Isoform Flip of Glutamate receptor 2
A [auth H],
B [auth F],
G [auth E],
H [auth G]		Voltage-dependent calcium channel gamma-2 subunit

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C,
D [auth B],
E [auth A],
F [auth D]		IPR028082Periplasmic binding protein-like IHomologous Superfamily
C,
D [auth B],
E [auth A],
F [auth D]		IPR001508Ionotropic glutamate receptor, metazoaFamily
C,
D [auth B],
E [auth A],
F [auth D]		IPR001828Receptor, ligand binding regionDomain
C,
D [auth B],
E [auth A],
F [auth D]		IPR001320Ionotropic glutamate receptor, C-terminalDomain
C,
D [auth B],
E [auth A],
F [auth D]		IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainDomain
C,
D [auth B],
E [auth A],
F [auth D]		IPR015683Ionotropic glutamate receptorFamily
A [auth H],
B [auth F],
G [auth E],
H [auth G]		IPR051072Voltage-dependent calcium channel gamma subunitFamily
A [auth H],
B [auth F],
G [auth E],
H [auth G]		IPR004031PMP-22/EMP/MP20/ClaudinFamily
A [auth H],
B [auth F],
G [auth E],
H [auth G]		IPR005422Voltage-dependent calcium channel, gamma-2 subunitFamily
A [auth H],
B [auth F],
G [auth E],
H [auth G]		IPR008368Voltage-dependent calcium channel, gamma subunitFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM