9A1O | pdb_00009a1o

Integrative model of the nuclear pore complex in constricted conformation from Schizosaccharomyces pombe

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
T, T1, T10, T11, T12 T, T1, T10, T11, T12, T13, T14, T15, T16, T17, T18, T19, T2, T20, T21, T22, T23, T3, T4, T5, T6, T7, T8, T9	Ely5	-	nuclear pore organization protein-containing complex organization pore complex assembly cellular component organization cellular component biogenesis nuclear pore complex assembly nucleus organization organelle organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
N, N1, N10, N11, N12 N, N1, N10, N11, N12, N13, N14, N15, N16, N17, N18, N19, N2, N20, N21, N22, N23, N3, N4, N5, N6, N7, N8, N9	Sec13	structural molecule activity	protein exit from endoplasmic reticulum cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport protein exit from endoplasmic reticulum cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport membrane organization vesicle budding from membrane endoplasmic reticulum to Golgi vesicle-mediated transport vesicle-mediated transport cellular component organization vesicle organization organelle organization cellular component organization or biogenesis COPII-coated vesicle budding Golgi vesicle transport RNA transport nucleic acid transport mRNA transport establishment of RNA localization RNA localization nucleobase-containing compound transport cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling nucleocytoplasmic transport nuclear transport protein localization to nucleus import into nucleus establishment of protein localization to organelle protein localization to organelle protein import into nucleus	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm cytosol vesicle coat intracellular vesicle transport vesicle membrane membrane protein complex membrane coat bounding membrane of organelle vesicle membrane cytoplasmic vesicle ER to Golgi transport vesicle membrane coated vesicle vesicle transport vesicle membrane coated membrane COPII vesicle coat cytoplasmic vesicle membrane coated vesicle membrane COPII-coated ER to Golgi transport vesicle organelle membrane GATOR2 complex Seh1-associated complex organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane
O, O1, O10, O11, O12 O, O1, O10, O11, O12, O13, O14, O15, O16, O17, O18, O19, O2, O20, O21, O22, O23, O3, O4, O5, O6, O7, O8, O9	Seh1	structural molecule activity	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling positive regulation of signaling RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport establishment of protein localization protein transport intracellular protein localization response to nutrient levels cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation response to starvation	protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm cytosol vacuolar membrane membrane vacuole bounding membrane of organelle organelle membrane membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen GATOR2 complex
M, M1, M10, M11, M12 M, M1, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M2, M20, M21, M22, M23, M3, M4, M5, M6, M7, M8, M9	Nup189c	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity RNA binding binding nucleic acid binding structural molecule activity structural constituent of nuclear pore nuclear localization sequence binding signal sequence binding peptide binding	localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization establishment of RNA localization macromolecule localization RNA localization localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport nuclear transport ribosomal subunit export from nucleus intracellular transport cellular component biogenesis ribosome biogenesis establishment of localization in cell cellular process cellular component organization or biogenesis nuclear export ribosome localization cellular component organization organelle organization chromosome organization transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA export from nucleus	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen nuclear pore cytoplasmic filaments
Q, Q1, Q10, Q11, Q12 Q, Q1, Q10, Q11, Q12, Q13, Q14, Q15, Q2, Q3, Q4, Q5, Q6, Q7, Q8, Q9	Nup132	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process mitotic DNA replication DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity nuclear DNA replication cell cycle DNA replication primary metabolic process DNA metabolic process nucleic acid metabolic process mitotic cell cycle nucleobase-containing compound metabolic process DNA replication mitotic cell cycle process cell cycle DNA replication maintenance of fidelity mitotic recombination-dependent replication fork processing cell cycle mitotic DNA replication maintenance of fidelity replication fork processing cell cycle process cellular component organization organelle organization chromosome organization cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport kinetochore organization	membrane-bounded organelle intracellular organelle mitotic nuclear bridge midzone cellular anatomical structure intracellular anatomical structure organelle mitotic nuclear bridge nucleus mitotic nuclear bridge midzone membrane domain intracellular membrane-bounded organelle protein-containing complex nuclear protein-containing complex nuclear pore outer ring endomembrane system membrane-bounded organelle intracellular organelle mitotic nuclear bridge midzone cellular anatomical structure intracellular anatomical structure organelle mitotic nuclear bridge nucleus mitotic nuclear bridge midzone membrane domain intracellular membrane-bounded organelle protein-containing complex nuclear protein-containing complex nuclear pore outer ring endomembrane system organelle envelope nuclear envelope nuclear pore nuclear membrane membrane organelle membrane membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen inclusion body nucleolar peripheral inclusion body nuclear inclusion body
S, S1, S10, S11, S12 S, S1, S10, S11, S12, S13, S14, S15, S16, S17, S18, S19, S2, S20, S21, S22, S23, S3, S4, S5, S6, S7, S8, S9	Nup37	-	localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular process establishment of localization	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
R, R1, R10, R11, R12 R, R1, R10, R11, R12, R13, R14, R15, R16, R17, R18, R19, R2, R20, R21, R22, R23, R3, R4, R5, R6, R7, R8, R9	Nup120	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen
P, P1, P10, P11, P12 P, P1, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19, P2, P20, P21, P22, P23, P3, P4, P5, P6, P7, P8, P9	Nup85	chromatin binding binding euchromatin binding structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process establishment of organelle localization ribonucleoprotein complex biogenesis ribosomal subunit export from nucleus cellular component biogenesis ribosome biogenesis organelle localization cellular component organization or biogenesis ribosome localization establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membraneless organelle intracellular membraneless organelle chromatin chromosome heterochromatin microtubule organizing center cytoskeleton spindle pole body microtubule cytoskeleton cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen inclusion body nucleolar peripheral inclusion body nuclear inclusion body euchromatin
I, I1, I10, I11, I12 I, I1, I10, I11, I12, I13, I14, I15, I16, I17, I18, I19, I2, I20, I21, I22, I23, I24, I25, I26, I27, I28, I29, I3, I30, I31, I4, I5, I6, I7, I8, I9	Nup45	structural molecule activity structural constituent of nuclear pore nuclear localization sequence binding signal sequence binding binding peptide binding	localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular process establishment of localization RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular process establishment of localization RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport establishment of protein localization protein transport intracellular protein localization	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen protein-containing complex nuclear protein-containing complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear periphery nuclear lumen protein-containing complex nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore cytoplasm
H, H1, H10, H11, H12 H, H1, H10, H11, H12, H13, H14, H15, H16, H17, H18, H19, H2, H20, H21, H22, H23, H24, H25, H26, H27, H28, H29, H3, H30, H31, H4, H5, H6, H7, H8, H9	Nup44	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis establishment of protein localization cellular localization NLS-bearing protein import into nucleus nitrogen compound transport nucleocytoplasmic transport transport nuclear transport cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis establishment of protein localization cellular localization NLS-bearing protein import into nucleus nitrogen compound transport nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport localization within membrane protein localization to membrane protein localization to nuclear envelope protein localization to nuclear inner membrane establishment of organelle localization ribonucleoprotein complex biogenesis ribosomal subunit export from nucleus cellular component biogenesis ribosome biogenesis organelle localization nuclear export ribosome localization	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen
J, J1, J10, J11, J12 J, J1, J10, J11, J12, J13, J14, J15, J16, J17, J18, J19, J2, J20, J21, J22, J23, J24, J25, J26, J27, J28, J29, J3, J30, J31, J4, J5, J6, J7, J8, J9	Nsp1	binding phospholipid binding lipid binding structural molecule activity structural constituent of nuclear pore	RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport nuclear transport ribosomal subunit export from nucleus intracellular transport cellular component biogenesis ribosome biogenesis organelle localization establishment of localization in cell cellular process cellular component organization or biogenesis nuclear export ribosome localization establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA export from nucleus	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen nuclear pore nuclear basket
Y, Y1, Y10, Y11, Y12 Y, Y1, Y10, Y11, Y12, Y13, Y14, Y15, Y16, Y17, Y18, Y19, Y2, Y20, Y21, Y22, Y23, Y24, Y25, Y26, Y27, Y28, Y29, Y3, Y30, Y31, Y4, Y5, Y6, Y7, Y8, Y9	Nup97	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process sexual reproduction reproductive process meiotic cell cycle cell cycle establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope organelle nuclear envelope nuclear pore
D, D1, D10, D11, D12 D, D1, D10, D11, D12, D13, D14, D15, D16, D17, D18, D19, D2, D20, D21, D22, D23, D24, D25, D26, D27, D28, D29, D3, D30, D31, D4, D5, D6, D7, D8, D9	Nup155	structural molecule activity structural constituent of nuclear pore	cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery cellular localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope localization protein localization to organelle macromolecule localization cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery cellular localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope localization protein localization to organelle macromolecule localization intracellular protein localization protein localization to nuclear inner membrane establishment of organelle localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport ribosomal subunit export from nucleus intracellular transport establishment of localization cellular component biogenesis ribosome biogenesis organelle localization establishment of localization in cell nuclear export ribosome localization establishment of protein localization nitrogen compound transport import into nucleus establishment of protein localization to organelle protein transport protein import into nucleus intracellular protein transport RNA transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nucleobase-containing compound transport	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear pore inner ring protein-containing complex nuclear protein-containing complex nuclear pore membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear pore inner ring protein-containing complex nuclear protein-containing complex nuclear pore cytoplasm
C, C1, C10, C11, C12 C, C1, C10, C11, C12, C13, C14, C15, C2, C3, C4, C5, C6, C7, C8, C9	Nup186	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport establishment of localization	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen protein-containing complex nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore nuclear pore inner ring
B, B1, B10, B11, B12 B, B1, B10, B11, B12, B13, B14, B15, B2, B3, B4, B5, B6, B7, B8, B9	Nup184	structural molecule activity structural constituent of nuclear pore	establishment of protein localization cellular localization NLS-bearing protein import into nucleus nitrogen compound transport nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell establishment of protein localization cellular localization NLS-bearing protein import into nucleus nitrogen compound transport nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus cellular process intracellular protein localization intracellular protein transport protein export from nucleus nuclear export mRNA transport mRNA export from nucleus RNA localization nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore nuclear pore inner ring
L, L1, L10, L11, L12 L, L1, L10, L11, L12, L13, L14, L15, L2, L3, L4, L5, L6, L7, L8, L9	Nup107	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process establishment of organelle localization ribonucleoprotein complex biogenesis ribosomal subunit export from nucleus cellular component biogenesis ribosome biogenesis organelle localization cellular component organization or biogenesis ribosome localization cellular component organization organelle organization chromosome organization transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle intracellular organelle mitotic nuclear bridge midzone cellular anatomical structure intracellular anatomical structure organelle mitotic nuclear bridge nucleus mitotic nuclear bridge midzone membrane domain intracellular membrane-bounded organelle protein-containing complex nuclear protein-containing complex nuclear pore outer ring endomembrane system membrane-bounded organelle intracellular organelle mitotic nuclear bridge midzone cellular anatomical structure intracellular anatomical structure organelle mitotic nuclear bridge nucleus mitotic nuclear bridge midzone membrane domain intracellular membrane-bounded organelle protein-containing complex nuclear protein-containing complex nuclear pore outer ring endomembrane system organelle envelope nuclear envelope nuclear pore nuclear membrane membrane organelle membrane cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
T, T1, T10, T11, T12 T, T1, T10, T11, T12, T13, T14, T15, T16, T17, T18, T19, T2, T20, T21, T22, T23, T3, T4, T5, T6, T7, T8, T9	IPR025151	ELYS-like domain	Domain
N, N1, N10, N11, N12 N, N1, N10, N11, N12, N13, N14, N15, N16, N17, N18, N19, N2, N20, N21, N22, N23, N3, N4, N5, N6, N7, N8, N9	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
N, N1, N10, N11, N12 N, N1, N10, N11, N12, N13, N14, N15, N16, N17, N18, N19, N2, N20, N21, N22, N23, N3, N4, N5, N6, N7, N8, N9	IPR037363	Sec13/Seh1 family	Family
N, N1, N10, N11, N12 N, N1, N10, N11, N12, N13, N14, N15, N16, N17, N18, N19, N2, N20, N21, N22, N23, N3, N4, N5, N6, N7, N8, N9	IPR001680	WD40 repeat	Repeat
N, N1, N10, N11, N12 N, N1, N10, N11, N12, N13, N14, N15, N16, N17, N18, N19, N2, N20, N21, N22, N23, N3, N4, N5, N6, N7, N8, N9	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
O, O1, O10, O11, O12 O, O1, O10, O11, O12, O13, O14, O15, O16, O17, O18, O19, O2, O20, O21, O22, O23, O3, O4, O5, O6, O7, O8, O9	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
O, O1, O10, O11, O12 O, O1, O10, O11, O12, O13, O14, O15, O16, O17, O18, O19, O2, O20, O21, O22, O23, O3, O4, O5, O6, O7, O8, O9	IPR037363	Sec13/Seh1 family	Family
O, O1, O10, O11, O12 O, O1, O10, O11, O12, O13, O14, O15, O16, O17, O18, O19, O2, O20, O21, O22, O23, O3, O4, O5, O6, O7, O8, O9	IPR001680	WD40 repeat	Repeat
O, O1, O10, O11, O12 O, O1, O10, O11, O12, O13, O14, O15, O16, O17, O18, O19, O2, O20, O21, O22, O23, O3, O4, O5, O6, O7, O8, O9	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
M, M1, M10, M11, M12 M, M1, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M2, M20, M21, M22, M23, M3, M4, M5, M6, M7, M8, M9	IPR025574	Nucleoporin FG repeat	Repeat
M, M1, M10, M11, M12 M, M1, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M2, M20, M21, M22, M23, M3, M4, M5, M6, M7, M8, M9	IPR037665	Nucleoporin peptidase S59-like	Family
M, M1, M10, M11, M12 M, M1, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M2, M20, M21, M22, M23, M3, M4, M5, M6, M7, M8, M9	IPR036903	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Homologous Superfamily
M, M1, M10, M11, M12 M, M1, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M2, M20, M21, M22, M23, M3, M4, M5, M6, M7, M8, M9	IPR007230	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Domain
M, M1, M10, M11, M12 M, M1, M10, M11, M12, M13, M14, M15, M16, M17, M18, M19, M2, M20, M21, M22, M23, M3, M4, M5, M6, M7, M8, M9	IPR021967	Nuclear pore complex protein NUP96, C-terminal domain	Domain
Q, Q1, Q10, Q11, Q12 Q, Q1, Q10, Q11, Q12, Q13, Q14, Q15, Q2, Q3, Q4, Q5, Q6, Q7, Q8, Q9	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
Q, Q1, Q10, Q11, Q12 Q, Q1, Q10, Q11, Q12, Q13, Q14, Q15, Q2, Q3, Q4, Q5, Q6, Q7, Q8, Q9	IPR037624	Nuclear pore complex protein Nup133-like	Family
Q, Q1, Q10, Q11, Q12 Q, Q1, Q10, Q11, Q12, Q13, Q14, Q15, Q2, Q3, Q4, Q5, Q6, Q7, Q8, Q9	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
Q, Q1, Q10, Q11, Q12 Q, Q1, Q10, Q11, Q12, Q13, Q14, Q15, Q2, Q3, Q4, Q5, Q6, Q7, Q8, Q9	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain
S, S1, S10, S11, S12 S, S1, S10, S11, S12, S13, S14, S15, S16, S17, S18, S19, S2, S20, S21, S22, S23, S3, S4, S5, S6, S7, S8, S9	IPR037626	Nucleoporin Nup37	Family
S, S1, S10, S11, S12 S, S1, S10, S11, S12, S13, S14, S15, S16, S17, S18, S19, S2, S20, S21, S22, S23, S3, S4, S5, S6, S7, S8, S9	IPR001680	WD40 repeat	Repeat
S, S1, S10, S11, S12 S, S1, S10, S11, S12, S13, S14, S15, S16, S17, S18, S19, S2, S20, S21, S22, S23, S3, S4, S5, S6, S7, S8, S9	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
S, S1, S10, S11, S12 S, S1, S10, S11, S12, S13, S14, S15, S16, S17, S18, S19, S2, S20, S21, S22, S23, S3, S4, S5, S6, S7, S8, S9	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
R, R1, R10, R11, R12 R, R1, R10, R11, R12, R13, R14, R15, R16, R17, R18, R19, R2, R20, R21, R22, R23, R3, R4, R5, R6, R7, R8, R9	IPR056548	Nucleoporin nup120-like, HEAT repeat domain, fungal	Domain
R, R1, R10, R11, R12 R, R1, R10, R11, R12, R13, R14, R15, R16, R17, R18, R19, R2, R20, R21, R22, R23, R3, R4, R5, R6, R7, R8, R9	IPR021717	Nucleoporin Nup120/160	Family
R, R1, R10, R11, R12 R, R1, R10, R11, R12, R13, R14, R15, R16, R17, R18, R19, R2, R20, R21, R22, R23, R3, R4, R5, R6, R7, R8, R9	IPR048884	Nucleoporin Nup120, helical domain, fungal	Domain
P, P1, P10, P11, P12 P, P1, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19, P2, P20, P21, P22, P23, P3, P4, P5, P6, P7, P8, P9	IPR011502	Nucleoporin Nup85-like	Family
I, I1, I10, I11, I12 I, I1, I10, I11, I12, I13, I14, I15, I16, I17, I18, I19, I2, I20, I21, I22, I23, I24, I25, I26, I27, I28, I29, I3, I30, I31, I4, I5, I6, I7, I8, I9	IPR024882	Nucleoporin p58/p45/NUP49	Family
I, I1, I10, I11, I12 I, I1, I10, I11, I12, I13, I14, I15, I16, I17, I18, I19, I2, I20, I21, I22, I23, I24, I25, I26, I27, I28, I29, I3, I30, I31, I4, I5, I6, I7, I8, I9	IPR025574	Nucleoporin FG repeat	Repeat
H, H1, H10, H11, H12 H, H1, H10, H11, H12, H13, H14, H15, H16, H17, H18, H19, H2, H20, H21, H22, H23, H24, H25, H26, H27, H28, H29, H3, H30, H31, H4, H5, H6, H7, H8, H9	IPR024864	Nucleoporin Nup54/Nup57/Nup44	Family
H, H1, H10, H11, H12 H, H1, H10, H11, H12, H13, H14, H15, H16, H17, H18, H19, H2, H20, H21, H22, H23, H24, H25, H26, H27, H28, H29, H3, H30, H31, H4, H5, H6, H7, H8, H9	IPR025712	Nucleoporin Nup54, alpha-helical domain	Domain
J, J1, J10, J11, J12 J, J1, J10, J11, J12, J13, J14, J15, J16, J17, J18, J19, J2, J20, J21, J22, J23, J24, J25, J26, J27, J28, J29, J3, J30, J31, J4, J5, J6, J7, J8, J9	IPR007758	Nucleoporin, NSP1-like, C-terminal	Domain
J, J1, J10, J11, J12 J, J1, J10, J11, J12, J13, J14, J15, J16, J17, J18, J19, J2, J20, J21, J22, J23, J24, J25, J26, J27, J28, J29, J3, J30, J31, J4, J5, J6, J7, J8, J9	IPR026010	Nucleoporin NSP1/NUP62	Family
Y, Y1, Y10, Y11, Y12 Y, Y1, Y10, Y11, Y12, Y13, Y14, Y15, Y16, Y17, Y18, Y19, Y2, Y20, Y21, Y22, Y23, Y24, Y25, Y26, Y27, Y28, Y29, Y3, Y30, Y31, Y4, Y5, Y6, Y7, Y8, Y9	IPR007231	Nucleoporin interacting component Nup93/Nic96	Family
D, D1, D10, D11, D12 D, D1, D10, D11, D12, D13, D14, D15, D16, D17, D18, D19, D2, D20, D21, D22, D23, D24, D25, D26, D27, D28, D29, D3, D30, D31, D4, D5, D6, D7, D8, D9	IPR042537	Nucleoporin, Nup155-like, C-terminal, subdomain 2	Homologous Superfamily
D, D1, D10, D11, D12 D, D1, D10, D11, D12, D13, D14, D15, D16, D17, D18, D19, D2, D20, D21, D22, D23, D24, D25, D26, D27, D28, D29, D3, D30, D31, D4, D5, D6, D7, D8, D9	IPR042533	Nucleoporin, Nup155-like, C-terminal, subdomain 1	Homologous Superfamily
D, D1, D10, D11, D12 D, D1, D10, D11, D12, D13, D14, D15, D16, D17, D18, D19, D2, D20, D21, D22, D23, D24, D25, D26, D27, D28, D29, D3, D30, D31, D4, D5, D6, D7, D8, D9	IPR042538	Nucleoporin, Nup155-like, C-terminal, subdomain 3	Homologous Superfamily
D, D1, D10, D11, D12 D, D1, D10, D11, D12, D13, D14, D15, D16, D17, D18, D19, D2, D20, D21, D22, D23, D24, D25, D26, D27, D28, D29, D3, D30, D31, D4, D5, D6, D7, D8, D9	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
D, D1, D10, D11, D12 D, D1, D10, D11, D12, D13, D14, D15, D16, D17, D18, D19, D2, D20, D21, D22, D23, D24, D25, D26, D27, D28, D29, D3, D30, D31, D4, D5, D6, D7, D8, D9	IPR004870	Nucleoporin, Nup155-like	Family
D, D1, D10, D11, D12 D, D1, D10, D11, D12, D13, D14, D15, D16, D17, D18, D19, D2, D20, D21, D22, D23, D24, D25, D26, D27, D28, D29, D3, D30, D31, D4, D5, D6, D7, D8, D9	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain
C, C1, C10, C11, C12 C, C1, C10, C11, C12, C13, C14, C15, C2, C3, C4, C5, C6, C7, C8, C9	IPR021827	Nucleoporin Nup186/Nup192/Nup205	Family
B, B1, B10, B11, B12 B, B1, B10, B11, B12, B13, B14, B15, B2, B3, B4, B5, B6, B7, B8, B9	IPR048883	Nucleoporin Nup188, N-terminal subdomain III	Domain
B, B1, B10, B11, B12 B, B1, B10, B11, B12, B13, B14, B15, B2, B3, B4, B5, B6, B7, B8, B9	IPR044840	Nucleoporin Nup188	Family
B, B1, B10, B11, B12 B, B1, B10, B11, B12, B13, B14, B15, B2, B3, B4, B5, B6, B7, B8, B9	IPR041634	Nuclear pore protein Nup188, C-terminal	Domain
L, L1, L10, L11, L12 L, L1, L10, L11, L12, L13, L14, L15, L2, L3, L4, L5, L6, L7, L8, L9	IPR007252	Nuclear pore protein 84/107	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 9A1O | pdb_00009a1o

Integrative model of the nuclear pore complex in constricted conformation from Schizosaccharomyces pombe

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

9A1O | pdb_00009a1o