8WYR | pdb_00008wyr

Cryo-EM structure of human CD5L bound to IgM-Fc/J


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth M]Ligase_CoA_2e8wyrM01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: Ligase_CoA_2ECOD (v294.1)
ALigase_CoA_2e8wyrA01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: Ligase_CoA_2ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
L [auth M]PF00530Scavenger receptor cysteine-rich domain (SRCR)Scavenger receptor cysteine-rich domainThese domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions. Domain
A,
B,
C,
D,
E,
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth M]Interleukin-2,CD5 antigen-like
I [auth J]Immunoglobulin J chain
A,
B,
C,
D,
E,
Interleukin-2,Isoform 1 of Immunoglobulin heavy constant mu

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
L [auth M]PharosP60568
I [auth J]PharosP01591
A,
B,
C,
D,
E,
PharosP60568