Cryo-EM structure of human CD5L bound to IgM-Fc/J
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L [auth M] | Ligase_CoA_2 | e8wyrM01 | A: a/b three-layered sandwiches | X: ATP-grasp_6 | H: ATP-grasp_6 | T: ATP-grasp_6 | F: Ligase_CoA_2 | ECOD (v294.1) |
| A | Ligase_CoA_2 | e8wyrA01 | A: a/b three-layered sandwiches | X: ATP-grasp_6 | H: ATP-grasp_6 | T: ATP-grasp_6 | F: Ligase_CoA_2 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| L [auth M] | PF00530 | Scavenger receptor cysteine-rich domain (SRCR) | Scavenger receptor cysteine-rich domain | These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions. | Domain |
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| L [auth M] | IPR001190 | SRCR domain | Domain |
| L [auth M] | IPR036772 | SRCR-like domain superfamily | Homologous Superfamily |
| L [auth M] | IPR000779 | Interleukin-2 | Family |
| L [auth M] | IPR030477 | Interleukin-2, conserved site | Conserved Site |
| L [auth M] | IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |
| I [auth J] | IPR024110 | Immunoglobulin J chain | Family |
| IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
| IPR050380 | Immune Recognition and Response Modulators | Family | |
| IPR003597 | Immunoglobulin C1-set | Domain | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR007110 | Immunoglobulin-like domain | Domain | |
| IPR003006 | Immunoglobulin/major histocompatibility complex, conserved site | Conserved Site | |
| IPR000779 | Interleukin-2 | Family | |
| IPR030477 | Interleukin-2, conserved site | Conserved Site | |
| IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |














